Gene Pcar_0107 details

Gene Information

• Locus tag: Pcar_0107
• Symbol: dnaK
• ID: 3722902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 129489
• End bp: 131393
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637749686
• Product: molecular chaperone DnaK
• Protein accession: YP_355540
• Protein GI: 77917725
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.0126383
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAG TTATCGGAAT CGACCTCGGC ACCACCAACT CCTGCGTGGC TGTCATGGAA 
GGCGGCGAAC CCGTCGTTAT CGCCAATGCT GAAGGCTCCC GCACCACACC CTCGATGGTG 
GCCTTTACCG AAAACGGCGA ACGCCTGGTC GGTCAGCAGG CCAAGCGCCA GGCTGTCACC 
AATCCGGAAA ACACCCTGTT TGCCATCAAG CGCCTTATCG GCCGCAAGTT CGACAGCGAT 
GCCGTGCGCC GCGACATTCA GATCAGCCCC TTCGAAATCG TCAAGGCCGA CAACGGCGAT 
GCCTGGGTGG ACGTCCGCGA CAAGAAATAC AGCCCGCCGG AAATCTCCGC GATGATCCTG 
CAGAAAATGA AGCAGACCGC CGAAGACTAC CTGGGCGAAA AAGTTACCGA CGCGGTTATC 
ACCGTACCGG CCTACTTCAA CGATTCCCAG CGCCAGGCCA CCAAGGACGC CGGCAAGATC 
TCCGGACTGA ACGTTTTGCG CATCATCAAC GAGCCTACCG CAGCCTCCCT GGCCTACGGT 
CTCGATAAGA AGAGCGAAGA AAAAATTGCC GTTTTCGACC TCGGCGGCGG TACCTTCGAT 
ATCTCCATCC TGGAACTGGG TGACGGTGTC TTCGAAGTAA AATCGACCAA CGGCGACACC 
TTCCTGGGCG GCGAGGACTT CGACCAGCAC ATCATGGACT ACGTTGCCGA CGAGTTCAAA 
AAGGAGCAGG GCATCGACCT GCGCAACGAC AAGATGGCGC TGCAGCGGCT CAAGGAAGCC 
TGTGAAAAAG CCAAGTGCGA ACTGTCCACC TCCATGGAGA CGGACATCAA TCTGCCCTTC 
ATTACCGCTG ACCAGTCCGG CCCCAAACAT CTCAACCTGC GCCTGACCCG CTCCAAGCTC 
GAGAGCATCT GCTCCAGCCT GCTGGCCAAA CTGGTCGAAC CCTGCCGCAT GGCGCTGAAA 
GACGCCGGTC TGTCTGCTTC CGATGTTGAC GAAGTGCTGC TGGTTGGCGG CATGACCCGG 
ATGCCCGCGG TGCAGGCCAA AGTTCAGGAG ATTTTCGGCA AAACTCCGAA CAAAGGCGTC 
AACCCGGACG AAGTCGTCGC CATCGGCGCC GCCATCCAGG GTGGTGTTCT GAAAGGTGAA 
GTCAAGGATG TTCTGCTGCT GGACGTTACG CCGCTGTCCC TCGGCATCGA AACCCTCGGC 
AGCATCATGA CCAAGCTTAT CGAGAAAAAC ACCACCATCC CCTGCAAGAA GAGCCAGATT 
TTCTCCACCG CGGCCGACAA TCAGCCGGCG GTATCGGTTC ACGTGCTGCA GGGTGAACGC 
GAAATGGCCG GCGACAACAA GACCATCGGC CGCTTCGAGC TGGTCGGCAT TCCGCCGGCA 
CCGCGCGGCG TGCCCCAGGT CGAGGTTACC TTCGACATCG ACGCCAACGG CATTCTGCAT 
GTCTCGGCCA AGGATCTCGG CACCGGCAAA GAGCAGTCGA TCCGCATTAC GGCTTCCTCC 
GGCCTGAGCG ACGAGGAAAT CGATAAAATG GTCAAGGACG CCGAAGCCCA CTCCTCCGAG 
GACAAGAAAA AACGCGAGAT CATCGAAGCC CGTAACCAGG CTGACGGGCT GGCGTACTCC 
ACCGAAAAAT CCCTCAAGGA GCACGGCGAT AAAATCGACG AGGAGACTCG CAACAATATC 
CAGACGGCTT TGGATGCTCT TAAAGCCGCC ATGGAAGGTG ACGACCCCGA AGACATCCGC 
CAGAAAAGCG AAGCCCTGGC CACGGCTTCG CACAAACTCG CCGAAGCGGT CTACAAGCAG 
ACCCAGGAAG GGGCGGAAGC CGCTTCCGAA GCTGGCGAGC AGAGCGCCGG CGACGAAGGC 
GTGGTCGATG CGGAATTCGA GGAAGTCGAC GAACAGAACA AGTAA 

 

Protein sequence

MGKVIGIDLG TTNSCVAVME GGEPVVIANA EGSRTTPSMV AFTENGERLV GQQAKRQAVT 
NPENTLFAIK RLIGRKFDSD AVRRDIQISP FEIVKADNGD AWVDVRDKKY SPPEISAMIL 
QKMKQTAEDY LGEKVTDAVI TVPAYFNDSQ RQATKDAGKI SGLNVLRIIN EPTAASLAYG 
LDKKSEEKIA VFDLGGGTFD ISILELGDGV FEVKSTNGDT FLGGEDFDQH IMDYVADEFK 
KEQGIDLRND KMALQRLKEA CEKAKCELST SMETDINLPF ITADQSGPKH LNLRLTRSKL 
ESICSSLLAK LVEPCRMALK DAGLSASDVD EVLLVGGMTR MPAVQAKVQE IFGKTPNKGV 
NPDEVVAIGA AIQGGVLKGE VKDVLLLDVT PLSLGIETLG SIMTKLIEKN TTIPCKKSQI 
FSTAADNQPA VSVHVLQGER EMAGDNKTIG RFELVGIPPA PRGVPQVEVT FDIDANGILH 
VSAKDLGTGK EQSIRITASS GLSDEEIDKM VKDAEAHSSE DKKKREIIEA RNQADGLAYS 
TEKSLKEHGD KIDEETRNNI QTALDALKAA MEGDDPEDIR QKSEALATAS HKLAEAVYKQ 
TQEGAEAASE AGEQSAGDEG VVDAEFEEVD EQNK