| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0103 |
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| Symbol | ispD |
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| ID | 3722898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 124783 |
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| End bp | 125484 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637749682 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_355536 |
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| Protein GI | 77917721 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 79 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTCT ATGTACTGAT TCCTGCCGCA GGCATGGGGC GACGCATGGG TGCGTCCGTC
AACAAACAAT ACCTGCCCCT GGGTGACCGG CCGGTCTTAA GCCACACCAT TGCCCTTTTC
GATCGCCATC CCGGTATCGA CCATATCTTT GTCATCTGCC CGGAAGCGGA GTTTCCGCTC
TGCCGGCGGG AAGTCATCGA TCCCTACGAT TTCCGCAAAG TGCGAGGTCT GGTTGCCGGT
GGCGCGGAAC GCCAGGATTC GGTTCGCAAC GGCCTGCAGG CCTGCCAGGC GGCTGAAGGA
GACATCGTCC TGATCCATGA CGGCGCCCGC CCGCTGCTGC CTCCCGCTCT CATCGAACCC
ACTGTTGCGG CGGCCCAACA ATGCGGCGCG GCGATTGTCG GGGTTCCGGT CAAGGACACC
ATCAAGCTGG TTACCGACGG CATGATCGAC TCGACCCCCG ATCGAAGTCT GCTGTGGCAG
GCCCAGACCC CGCAGGCATT CCGTTTCGGC CTGATCCGCG ACGCTCACGC GCAAGCCCTG
CAGCAACACC ACAAAGGAAC GGACGACGCT TCACTGATCG AATGGCTCGG CGGCCGCGTC
GCCATGATCG AAGGCAGTTA TCGCAACATC AAGATCACCA CGCCCGAGGA CCTGGTGCTG
GCCCAGGCCT TTCTCGATAC TCCAGGAGAT TTTCAAGCAT GA
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| Protein sequence | MSVYVLIPAA GMGRRMGASV NKQYLPLGDR PVLSHTIALF DRHPGIDHIF VICPEAEFPL
CRREVIDPYD FRKVRGLVAG GAERQDSVRN GLQACQAAEG DIVLIHDGAR PLLPPALIEP
TVAAAQQCGA AIVGVPVKDT IKLVTDGMID STPDRSLLWQ AQTPQAFRFG LIRDAHAQAL
QQHHKGTDDA SLIEWLGGRV AMIEGSYRNI KITTPEDLVL AQAFLDTPGD FQA
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