| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0095 |
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| Symbol | |
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| ID | 3722890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 112975 |
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| End bp | 114585 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637749674 |
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| Product | putative sensory transduction system, regulatory protein |
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| Protein accession | YP_355528 |
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| Protein GI | 77917713 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.348008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGG CCTACAAAAT TATTACGGTT CTGGCGGTAT CGCTGGGCAT CGGTCTGTCT
TTGCTGCTGT TCTGGCGCCT TCGTATGGTG GAAAAGCGGG AGCTTTTGAC CACGTTCCAG
CGTGAAGTCG AAGCCAAAGC CGTGATCTTT GATCGCCAAA TTCTTTTGAA TCTCGAAGTG
CTTTATGCGT TTAAGAACCT GTTTTCCGCT TCCCAGAGGG TCGAAGAAAG CGAATTCGCC
GCTGTGGCTT TCGAGACTAT GCAGCGCCAT GCGGGGATCC GCGCCCTGGC CTGGGTGCCT
TATGTCCCCG AAACGCAGCG ACGGGCGTTC GAGCTGGCGC GTTATGCGGA CCCTTCAGGT
TTTCAATTTC ATGAGTTCTC GGCAGGGGGC TGGCGGACGG TTGCCGGTTC TCGCAAGGCC
TATTTCCCGC TATATTTTCT GGAGCCGGAG GCATCCTTCA AGCCGGTTGT GGGAGGGGAT
CTGGGCGCCG ACCCGGCATG CCTGAGTCTG TTGAACGCCG TCCGGGACGA AGGTCTGGTC
CAGGTTGCCG GAAATTTCAA AATTGCCGGC TTAAACGATT TGCAGCCCAC CTTTTTAGGG
GTGCTGCCGG TTTATTCGGG GCGCCCGGAA ACGCAGGCCT CCCGGCGTGA TAATCTGCTC
GGATTTATCG TCGGCATCTT TGATTTTACG ACCCTGTTCC AGGGCTCTGG GTGGGGGGAT
TTCCCGGATC TTCTCGCCGT GCGCCTTATC GATGCCCGCA ACTCCGCTGC GAACAGGGAG
CTGTATGCTT ACCGACGGCA GACCGGCGTA CCGCTGCCGT CGGCTTTCAT CTGCGAACAT
GATGTACCGG TGGTCGGAAA AGCCCATTGG CGATTGCAGG CCGAACCCGT CGGCGATTAT
TTCAGTCGTT ATCGGAGCGT AACCCCCTGG TTGCTCGGGC TGGCCGGGTT GCTCCTCACT
TTGATGGTGC CGCTGGTGAT GTGGTTTGTG AGCAGGCGTG CGGCGTCCGT TGATAAGCTG
GTTGCGCAAA GAACTTACGA GCTGGACGAA GCCAATCGAC GACTCGCCAG TTTGTCCCTG
ACCGATGGTT TAACCGGCAT TGCCAATCGC CGCTCTTTCG ACGATCATCT TGCGCAGGAA
TGGAAACGGG CCCTGCGCGA TCGGCACCCG CTGAGTCTGA TCATGGTCGA TATCGATCAT
TTCAAGGCCT ATAACGATTA TTACGGGCAC CTGGCCGGTG ACGATTGTTT GCGCCAGGTG
GCGCGCATGC TTCAATCCGT GGTGGCGCGT CCCGGCGACC TGGTGGCGCG GTATGGCGGC
GAGGAGTTTG CCTTGATACT GCCGCAAACC GATCATGGTG CCAAAAGCCT GGGGGAATCG
TGCCGCGCAG CGGTAGCCGG GGGCAAGATC CCGCATCACG CTTCGCCGGT AAAACCCGTC
GTCACGGTGA GTGTCGGGGT GGCGACAATG ATTCCCCATG TCGAGGATGA TCCTTCCCAG
CTTATCAAAG CGGCGGATCA GGCCATGTAT CGGGCCAAGC TCCTGGGGCG TGACCATGTG
GTGGTGGAGG CGCCGGCTTC GCAGAGTGTC TTCATGCCCG GTGGAGTTTA G
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| Protein sequence | MNKAYKIITV LAVSLGIGLS LLLFWRLRMV EKRELLTTFQ REVEAKAVIF DRQILLNLEV
LYAFKNLFSA SQRVEESEFA AVAFETMQRH AGIRALAWVP YVPETQRRAF ELARYADPSG
FQFHEFSAGG WRTVAGSRKA YFPLYFLEPE ASFKPVVGGD LGADPACLSL LNAVRDEGLV
QVAGNFKIAG LNDLQPTFLG VLPVYSGRPE TQASRRDNLL GFIVGIFDFT TLFQGSGWGD
FPDLLAVRLI DARNSAANRE LYAYRRQTGV PLPSAFICEH DVPVVGKAHW RLQAEPVGDY
FSRYRSVTPW LLGLAGLLLT LMVPLVMWFV SRRAASVDKL VAQRTYELDE ANRRLASLSL
TDGLTGIANR RSFDDHLAQE WKRALRDRHP LSLIMVDIDH FKAYNDYYGH LAGDDCLRQV
ARMLQSVVAR PGDLVARYGG EEFALILPQT DHGAKSLGES CRAAVAGGKI PHHASPVKPV
VTVSVGVATM IPHVEDDPSQ LIKAADQAMY RAKLLGRDHV VVEAPASQSV FMPGGV
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