| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0064 |
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| Symbol | |
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| ID | 3722859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 79282 |
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| End bp | 81654 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637749643 |
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| Product | collagenase-like protease |
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| Protein accession | YP_355497 |
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| Protein GI | 77917682 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCACA CATCGAAATA TCCGGAACTG CTGGCCCCGG CAGGCAGCCT GGAGGCCTTT
TTCGCCGCCA TGGAATCGGG CGCGGATGCC GTATATTGCG GCCTCAAGGA ATTTTCCGCC
CGCGCCAAAG CGCGCAATAT TTCCATGACC GATCTGGAAG GCATGCTGGC CTACGCCCAC
AAGCTGGATC GCCGCATCTA CGTTACGCTC AACACCCTGA TCCGTGAAGA GGAGTTACCG
CGCCTGACCG AAATCCTGGC CGGCCTGGAA GCGCTCGGCG TCGACGCGAT CATTCTGCAG
GATCTGTCCG TCTGGAAAAT GATCCGCGAC CATTTTCCCG GCCTGCCGTT GCACGCCTCC
ACCCAGATGA CGGTGCACAA CGCCGCCGGT ATACGCACCC TGGAACGCAT GGGTTTCAAG
CGGGCGGTGC TGGCCCGCGA ACTGACCCTG GAGGAAATTA CCGCCATCCG CCGGGAGACC
ACCCTGGAGC TTGAGCATTT TATCCATGGC GCCCTGTGTT TCAGTTATTC GGGACAATGC
CTGTTTTCCT CCTGGCTGGG AGGCAAAAGC GGCAATCGGG GCCGCTGCGC CCAACCTTGC
CGGCGTCGTT ACAGCTACCG GCAGAAATAC GGCTACTATT TTTCGCCCAA CGATTTATCC
GTCATCGACC TGCTGCCCGA ACTGCAACAG GCCGGCGTCG GCAGTCTTAA AATCGAAGGG
CGTATGAAAA GCGCCGAATA CGTGGCCAAC GTGGTGGCGG CTTATCGCCG TGCTCTCGAT
GCCGCTCCCG GTCAACGCAA ACAGGCTCTG AAGCAGGCCA AAGAATGCCT CAAGCAGTCT
TTCGGACGCC TGCCGACCAA GGGTTTTCTG CCCGGCCCCA AGCCGACGGA TATCGCCATC
CCCTCCCTGA AGGGGGCCAC CGGCCGTTTT CTGGGCGAAA TCAGCGCCCT GCGCGGCGGC
GACCTCAGCT TTAAAAGCCG CGACCGCTTG CACCTCGGCG ACCGTATCCG CATCCAGCCG
AAAAGTGATC AGGCCGGCAC CGCATTTACC ATCAAGGAAT TGCGCCTGGG GCGGCGCAAC
GTCAAGGCCG CACCGGCCGG CAGTCTGGTA ACCGTGCCGT CAACTTTCCG GGATACCTTC
CGCATCGGCG ATGCCGTTTT CAAGGTCTCT TCCGAACAGG CCTTCACCAT GAGCGAAGCG
GCCTGCCGTC GCAAACTGCA GCAGGCGGGC AAAATCCCGG ATCACATCGA TCTGCACATC
GAACTGCAGG ATGAAACCCT GACACTCGCG GGGCGATCCG GAGCCGTGGT TTTGGAACAA
TCCTATGATG TGCCGGTGTT CCCCGCCAGT GACAGCCCTT TATCGTCGGA TACCCTGCGC
TCTGTATTCG AACGCAGCGG CAAACACGAG CTGGTGCTTG GCAACCTGAG TACCGGCCCG
CTACCTCCCG TGGTCATCCC TCCGAGCCGG CTCAAGGAGG TCCGTCGTCT GTTCTACCAG
GCCGTGTGCG ATCAGCTGGG AACTGCGGAC CGTCAAAATC GCCAGCAACA CCTGGCCAAC
GCCAAACATG CGCTGTTACC GCACCGCTCA TCACCGGTCA GCCCGCAAAA ACGGTTGATC
ACCGTTGCCA TGGATCGCAT GCGGGACAGC CATCTGCTCA ACGATCCGCT GGTCGACCGG
ATCATGCTTC CGCTAACCGT CTCCAACGTG CAGCAACTGG GGCAGCGTCT TTCCGGGCGC
GAGGATCGCG TTATCTGGGA TATCCCCTTT GTGTTACTGG GTTCCGATTG GCAGGAATGT
CGACGGGCGG TACGCATCCT GGTTGAACGG GGCTTTCGCA CCTTTCGCCT CAACAACCTG
GGGCATTTTC CCCTGTTCGA CGGGCTGCCG CAACTCACCC TGCTGAGCGG CTGGCGCCTC
TTCACTCTCA ACAGTCAGGC GGCCCTGGCC TGGAACGAAC TGGGTATCTC CGAAGCAACC
CTGTATCTGG AAGACGACCG CACCAACCTG GCCGCGCTGC TGCAACGCGA CACGGGAATC
GAAACCAATC TGACCGTCTA CGCATCGGTG CCCCTGATCA CCTCCCGCAT TCCCATTCGA
GGCGTGCGTA GCGACAGCCC GATCCTTTCC GACCGCAACG ATGCCTATCG GGTAACCCAA
CGTGGCGGCC AGACGGTAGT CAGCTCAACC ACCGACTTTT CCCTGCTCGG GCATCTGCCC
GAACTGGAAC ACATGGGCTG CCACCGCTTC ATCATCGACC TGTCTCATGT CGGCCCCTTC
TCCGCTCAAG GCAAACAGGT GCTGGAGGCT GTGCGCCGGG GCGGCAATAT TTCGGGCACC
TCGGATTTCA ACTTCGAAAG CGGTATGGAA TAA
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| Protein sequence | MPHTSKYPEL LAPAGSLEAF FAAMESGADA VYCGLKEFSA RAKARNISMT DLEGMLAYAH
KLDRRIYVTL NTLIREEELP RLTEILAGLE ALGVDAIILQ DLSVWKMIRD HFPGLPLHAS
TQMTVHNAAG IRTLERMGFK RAVLARELTL EEITAIRRET TLELEHFIHG ALCFSYSGQC
LFSSWLGGKS GNRGRCAQPC RRRYSYRQKY GYYFSPNDLS VIDLLPELQQ AGVGSLKIEG
RMKSAEYVAN VVAAYRRALD AAPGQRKQAL KQAKECLKQS FGRLPTKGFL PGPKPTDIAI
PSLKGATGRF LGEISALRGG DLSFKSRDRL HLGDRIRIQP KSDQAGTAFT IKELRLGRRN
VKAAPAGSLV TVPSTFRDTF RIGDAVFKVS SEQAFTMSEA ACRRKLQQAG KIPDHIDLHI
ELQDETLTLA GRSGAVVLEQ SYDVPVFPAS DSPLSSDTLR SVFERSGKHE LVLGNLSTGP
LPPVVIPPSR LKEVRRLFYQ AVCDQLGTAD RQNRQQHLAN AKHALLPHRS SPVSPQKRLI
TVAMDRMRDS HLLNDPLVDR IMLPLTVSNV QQLGQRLSGR EDRVIWDIPF VLLGSDWQEC
RRAVRILVER GFRTFRLNNL GHFPLFDGLP QLTLLSGWRL FTLNSQAALA WNELGISEAT
LYLEDDRTNL AALLQRDTGI ETNLTVYASV PLITSRIPIR GVRSDSPILS DRNDAYRVTQ
RGGQTVVSST TDFSLLGHLP ELEHMGCHRF IIDLSHVGPF SAQGKQVLEA VRRGGNISGT
SDFNFESGME
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