| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0048 |
|---|
| Symbol | glpC |
|---|
| ID | 3723167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 56904 |
|---|
| End bp | 58310 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637749627 |
|---|
| Product | sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit |
|---|
| Protein accession | YP_355481 |
|---|
| Protein GI | 77917666 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.923386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGAA AAGTGGATAA AAAACAAAAG ACGCCGCAGG AAGTTCTCCG TGACGTTATG
CGATTATGCG CTGACTGTGA CACCTGCCGC ACCATGATGG AGGAGGATTG CGCATTTTTC
ATCGAACTCT ACCGGCTTGT TGATCAGGAG CAGGAAGAAG GAATCCCCAT TACCGAATCG
CAACTGCGTT ACCTGGCCGA ACTCTGTACT CTGTGCGGCT TGTGTCCCTG TCCGAAAGTC
CCCATGGATG TGATGGAGGC CAAGACCCGC TATGTTGAAC GGGAGGGCCT TCCCCTGGCA
ACGCGCCTGC TCAATGATGT CCCACGCATG GCCCGACTGT GCGGTACTTT TCCCCGCCTG
GTTAAAGCCA TGCAGGAGAA TAAGATCCTC GGTCCTTTGT TGCGCAAAGC GACCCGCATC
CACCCTGACC GGCAATGGCC CTCCTTTCCT CAACAGAATT TTTTCAAGTG GGCGGCAGCC
AAGGGGCTGG ACAAGCCGCA AAACGGCGAT CACCAAGTCG CCTACTTTGT TGGTTGTACC
GCAGGGTATC TGTTCCCCCA GATTGGTCGT AGCGTGGTGG AGATCCTGCA ACACAATGGT
GCTAACGTCT ATGTGCCGCC ACAGCAATGT TGCGGTATGC CCTTCCTGGT GGAGGGGGAC
CGCAATCGTA CCCTGCAGTT GGCCCGAACC AATATGGAGA AGCTGCTTGA ATCGGTGCGC
GGCGGCGATG ACCTCATTTA CTCCTGCCCT ACCTGCGGCT TTTTCCTGAA AAGACTGCTC
AAGGACAGGG CATATTATTC CGATGTGTTC CAGAAGTCGG TCAACGCGGT TGAGGGCGAA
TTGAAGGTTC CCGCTCCCGA AAAAGGCGAG AACCAGTTCT GGCACCTGAA AAAATCCATG
TATCACGACA TCCTGAAGGA CGATGGGTAT TTTTCTTCCA TCGACCCCAT GGATCGTATT
CAACTTGCCG ATCATCTCTT CGATTTCGGC ATTTACCTGG CGCGCCTTCA TGCCGAAGGG
AAGCTCGCCA CCGACTTCGC ACCCCTGCCT GAGCGCATGG CTTATTTTGC ACCGTGTCAT
TTGCGGGAGC AAAAAATGGG GCGGCCTTAC CTCGATCTGC TGAAGATGGT TCCCGGACTG
GACATCGAAG AGGTCGGCAG CGATTACGAC TGCTGCGGCA TGGGAGGCAT TTTCGGCTTC
AAGGAACATT TTCACCAGAA GTCCCTGGAT CTGGGAGCAC CGCTGATGAA AAAGATCCGA
GCGCATGATC CGCAGGCCAT CGTCACCGAC TGCATGAGTT GCCGATTGCA GTTCAGTCAC
TGCCTGCCCT ATCCCGTATA TCACCCGGTT GAAGTGCTGG CCAGGGCCTA TCGCAGCGAG
GGGTCGCAAG TCAACCGGCA GGAATAA
|
|---|
| Protein sequence | MDRKVDKKQK TPQEVLRDVM RLCADCDTCR TMMEEDCAFF IELYRLVDQE QEEGIPITES
QLRYLAELCT LCGLCPCPKV PMDVMEAKTR YVEREGLPLA TRLLNDVPRM ARLCGTFPRL
VKAMQENKIL GPLLRKATRI HPDRQWPSFP QQNFFKWAAA KGLDKPQNGD HQVAYFVGCT
AGYLFPQIGR SVVEILQHNG ANVYVPPQQC CGMPFLVEGD RNRTLQLART NMEKLLESVR
GGDDLIYSCP TCGFFLKRLL KDRAYYSDVF QKSVNAVEGE LKVPAPEKGE NQFWHLKKSM
YHDILKDDGY FSSIDPMDRI QLADHLFDFG IYLARLHAEG KLATDFAPLP ERMAYFAPCH
LREQKMGRPY LDLLKMVPGL DIEEVGSDYD CCGMGGIFGF KEHFHQKSLD LGAPLMKKIR
AHDPQAIVTD CMSCRLQFSH CLPYPVYHPV EVLARAYRSE GSQVNRQE
|
|---|
| |