Gene Pcar_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0027 
Symbollon 
ID3723126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp29512 
End bp31854 
Gene Length2343 bp 
Protein Length780 aa 
Translation table11 
GC content59% 
IMG OID637749606 
ProductATP-dependent protease La 
Protein accessionYP_355460 
Protein GI77917645 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGCCAT CCGTCCGAGA TTTTGAACTC CCCGAAGCTC TGCCTTTGTT GCCGGTGCGG 
GACGCGGTGA TCTTTCCGCA CATGATCCTG CCTTTGTACA TCGGTCGCAG TCAGTCTCTG
GCTGCGGTGG AACAAGCCTT GGCGGGCGAT CGACTGATCA TGCTGGCGTG TCAGAAAGAG
CTGGGCCAGG AAACTCCGAC CGCAGAGGAT ATCTACGCTT TTGGCTGTGT CGGGATGATC
ATGCGTTCCG TCAAATTACC TGATGGCCGC AGCAAGATCC TGGTACAGGG ACTGGGCAAA
GCGCATGTTG TGCACTACCT TTCCAGCGTG CCGTATTTTG CCGTCACCAC CGAAGCCGTC
GAGGATCTGG TCGTCGAATC ATCCATGCAA ACAGAGGCAT TGATGCGTTC GGTACGCGAG
CAATTAACCG AATTGCACGG CATGGGACGC TCGTTTTCCA ACGAAGTACT GGTCGCCATG
GAAAATATCG AGGATCCCGG TCATCTGGCG GATGTTGTGG CCAGCAATCT CGGACTGAAA
GTCGCGGTTG TTCAGCCGTT GCTGGAAGAA AACGATCCTA TCCGACGCTT GCACAAAGTC
CAGGAGTTGT TGCTCCGGGA AACCGAACTG ATCAACGTGC AGCAGCGCAT ACAGACCCAG
GCTCGTGAGG AGATGGGAAG CTCACAGCGC GAATATTTTC TGCGGGAGCA GTTGCGCGCC
ATCCAGTCGG AACTGGGCGA AGCCGATGCC AAAGCGGAAG ATCTTCTGGA ACTGCGGGCC
CAGATCGACA AGGCCAAACT GCCGGCCGAT GTCGGCAAGG AGGCGCACAA GCAACTGCGG
CGTCTGGAGA CCATGCCTGT AGAGGCGGCG GAATACGCCA TGCTGCGTAC CTATCTGGAA
TGGTTGGCGG ATCTGCCCTG GCAGAAGAGC ACCCGCGACA GTATCGATCT GGCCGCGGCG
CGGGCCATTC TGGACGAAGA TCATTACGAT CTGGATAAGG TCAAAGAACG CATTCTGGAA
TTTCTTGCGG TATGCAAACT GAAAAAAAAG CTTAACGGGC CGGTGCTGTG TTTTGTCGGT
CCGCCGGGGG TCGGTAAGAC CAGTCTCGGC AAGTCGATTG CGCGCGCATT GGGGCGCAAA
TTCGTTCGTG TGTCGTTGGG CGGTTTGCGC GACGAGGCGG AAATCCGCGG TCACCGCCGC
ACCTATGTCG GAGCCTTGCC GGGACGGATT CTGCAGAGCA TGAAACAGGC CGGCAGCAAC
AACCCGGTTT TCATGCTCGA CGAACTGGAC AAGGTCGGGG GGGCCGATTT CCGCGGCGAC
CCTTCGGCGG CCCTGCTGGA ATTGCTCGAC CCCGAGCAGA ATCACGCCTT TTCCGATCAT
TACATCAATC TGCCGTTCGA TCTCTCCAAG GTCATGTTCG TTGCCACGGC CAACGTTCTG
GATAGCGTGC CGTCGGCTTT GCGGGATCGC CTCGAGGTGA TCCGGCTGGC CGGTTACAGT
ACCGAGCAGA AGCTCGCGAT TGCCCGGCGT TACCTCATCC CCCGGCAACT TGAGGCCAAC
GGTTTGCAGG AATCCGACCT CGCCATTTCC CGCAATGCCT TGTTGAAAGT CATCGGCGAA
TATACGGCCG AGGCCGGTTT GCGCAACCTG GAGCGCGAAC TCGGCGGCAT CTGCCGCAAG
GTGGCGCGTC GCCGGGCGGA AAATGATCTG CGCCCCGTGC GGGTTACCAG CGGCACCCTG
GCCTCTTATC TGGGACCATC CCGTTACCTC GACGAGGACA AGCTGGAGGA ACACGAGGTC
GGTGTGGTGA CCGGCCTGGC CTGGACCGAG GTCGGCGGGC AGATTCTGCA TGTCGAAGCC
AGTATCATGC CTGGCAGCGG ACAGTTGCAC CTAACCGGAC AATTGGGGGA CGTCATGAAG
GAAAGTGCCC AGGCAGCCCT GAGTTACGCC CGGGCCCATG CCGGCCAGTG GGGTATCGAT
CCGGATTTTT ACAAGTCTCT GGACATTCAT ATCCACGTGC CGGCCGGCGC CATCCCCAAG
GATGGTCCGA GTGCCGGGGT CACCATCATG ACTGCGCTGG TTTCGATACT GTCGCAACGA
CCGGTCAATC GCGAGGTTGC CATGACCGGC GAAATCACCC TGCGTGGCCA GGTTTTGCCC
ATCGGTGGGG TCAAGGAAAA GCTTTTGGCA GCGGTTCGGG CCGGCATGCA AACCGTGGTG
CTGCCCCGCC GTAACCAAAA GGATCTGGCC GATGTACCGG CGGGGTTGCG TCGCCGTTTG
GCGTTGGTAT TTGCCGACCG GGTGGAAGAT GTTCTGGCGG TGGCGTTGGA GGGAAAAGCG
TGA
 
Protein sequence
MQPSVRDFEL PEALPLLPVR DAVIFPHMIL PLYIGRSQSL AAVEQALAGD RLIMLACQKE 
LGQETPTAED IYAFGCVGMI MRSVKLPDGR SKILVQGLGK AHVVHYLSSV PYFAVTTEAV
EDLVVESSMQ TEALMRSVRE QLTELHGMGR SFSNEVLVAM ENIEDPGHLA DVVASNLGLK
VAVVQPLLEE NDPIRRLHKV QELLLRETEL INVQQRIQTQ AREEMGSSQR EYFLREQLRA
IQSELGEADA KAEDLLELRA QIDKAKLPAD VGKEAHKQLR RLETMPVEAA EYAMLRTYLE
WLADLPWQKS TRDSIDLAAA RAILDEDHYD LDKVKERILE FLAVCKLKKK LNGPVLCFVG
PPGVGKTSLG KSIARALGRK FVRVSLGGLR DEAEIRGHRR TYVGALPGRI LQSMKQAGSN
NPVFMLDELD KVGGADFRGD PSAALLELLD PEQNHAFSDH YINLPFDLSK VMFVATANVL
DSVPSALRDR LEVIRLAGYS TEQKLAIARR YLIPRQLEAN GLQESDLAIS RNALLKVIGE
YTAEAGLRNL ERELGGICRK VARRRAENDL RPVRVTSGTL ASYLGPSRYL DEDKLEEHEV
GVVTGLAWTE VGGQILHVEA SIMPGSGQLH LTGQLGDVMK ESAQAALSYA RAHAGQWGID
PDFYKSLDIH IHVPAGAIPK DGPSAGVTIM TALVSILSQR PVNREVAMTG EITLRGQVLP
IGGVKEKLLA AVRAGMQTVV LPRRNQKDLA DVPAGLRRRL ALVFADRVED VLAVALEGKA