| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0023 |
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| Symbol | |
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| ID | 3723122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 24332 |
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| End bp | 26887 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637749602 |
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| Product | Rad3-related DNA helicases |
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| Protein accession | YP_355456 |
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| Protein GI | 77917641 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000466591 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA CTTTCACATC ACAGGTCATC GAGGTCATGC GGCAGGCCAT AGCTGCGGCC
GATGGTCGGG AGGTCTTTTT TCAAGGGCGC ACCGACGCTG ACTTGCGGGT TGTGCAGGTG
CAGGTACTGG CGCGTGGTAA CGGCAGTGCC GTGCCGGCCA TTGTGCAGGA GTGCCGTTAC
GGGGATGTCG TCATTCATAA CCACCCCTCG GCCTGTCTGG AACCATCCAT GGCCGACCTG
GAGATCGCTT CGCGTCTCGG ATCCCAGGGG GTCGGATTTC TGATTGTTGA TAACCCTGTG
GAAAATGTTT ATAAGGTGGT GGAACCCTTT GCTCCACGGG AGCCTCGACA CCTGCCGCCG
GAAAAAATCG ACGCCCTGCT CGGTCCCAAC GGCGTGGTGG CCAAGACGCT GTCCGGCTAC
GAAGAACGCC CCGAACAGCT GCGTATGGCT TTTGCCGTGG GAGAGGCTTT CAATCGCGGC
CAGCTGGCGG TTATCGAAGC CAGTACCGGC ACCGGCAAAA GTCTTGCGTA TCTGGTGCCG
GCTCTGCTTT GGGCGTTGGC CAACGAGGAG CGGGTGGTGG TATCGACCAA CACCATCAAT
CTGCAGGAAC AGTTGATTCG TAAGGATTTG CCGTTTTTAC AGCGGGCTGC CGGCCTCGAT
TTTCGGGCGG TACTGGTCAA GGGGCGCAAC AACTATCTGT GTCGGCGACG GGCGGAAACG
GCGCGGCTGG AGCCGGGATT GTTCGATGCT GAGCTCAGCG GTGAGCTCAC CGCCATTCTG
GAATGGGCGG CCGCCAGTCA TGAAGGGTCG CGCGAGGAAT TGACCTTTCT GCCCCGCTCC
GAGGTGTGGG AAGAGGTGCG TTGCGAAGCC GACCAGTGTG CGCGGGTAAA GTGCCATCAT
TACGGCGCCT GTTTTTTCCA CAAGGCTCGC CGCCAGGCCG CTCAGGCCGA TTTACTGGTC
GTCAACCACG CTTTGCTGCT GTCGGACTTG GCGTTGCGCC ACCAGACCGA TAATTACAGC
ACGGCCGCCG TATTGCCGCC CTTCGATCGT ATTGTTCTGG ACGAAGCCCA CCACCTCGAG
GATGTGGCGA CCCGCTATTT CGCCTCCCAG GTTACACGCT ATGCTTTTGC CAGGGTGTTG
GGCAAGCTGC GCCATTTGCG CAAACCGGAC AAGGGGGTGC TGCCGCGTTT CATCAATGCC
CTGGCGCGGG AACTGCCGGA TACGGAGGAT GTTATGTACC GGCGGTTTTA CGAAGCTGTC
GAGGCGTTGT CGGGTAGCAG CCATGCTCTC TATGAAAAGG CCCTGCAGAC CCTTGAGGGT
ATAGGGCTGG ATCTGGCGAC GGCCCATGGT ACCCGTGTCG GGGCCGAGGA ACTGCGGCGC
CGGGTGATCC CGGAAATGAG GGAAAGCGCA TTCTGGTCCT CGGCGGTGGA GCGTATCCGC
GAGTTGGCCG GGGCCAGCGA GGAGATGGCT CAGGCGCTGG AAGCGTTGCT CAAAGACAGC
GAAACTCTGC CGGAGGCGGT TGCGGACAAG CTGGTTTCAC CGCTGACCGA TCTGCGAGGC
ATTGCCGATC GCCTGGAGGC TATTGCCGCC GACCTGCGAT TCTTCATCGC CCGGGATGAC
AGTACCTGTG CCTGGTTCGA GGTGGTCGAG GGTCGCATCG GACGTGGCCG CGGAGTGATC
ACCCGCCTTT GCACGGCCCC CCTGGACGTT GCCGGTCAAC TCAAGGAAGG GCTTTACGAC
CGCTTCCGCA GTGTGGTGTT GACCAGCGCC ACCCTGGCGG TGGGGGAATC GTTCCAGTAT
TTGAAAAGCC GGGTGGGGCT CGACCGGGTT GAAACCGGCC GGGTGCGGGA ATTACTGCTC
CACTCGCCCT TCGATTTTTC CAGCCAGGCG TTGGTGGTGG TGCCGACCGA TGTGCCCGAA
CCGGGGCGTT CGGGCTATCC GGCCATGGTT CGCGATTTGA CGGAACGTGC CGTGGTGGCG
GCTGACGGTC GCACCTTTGC GCTGTTTACG GCGTACGGTT TGTTGCGCCA GGTCTACGGG
GAACTGGCGC CGGTGCTGCA GGCGCGCGGG TATCGCTGCC TGCGCCAGGG GGAGGCGAAT
CGCCATCGTT TGCTGAAAAG CTTCGCCGAG GATGAAACCA GCGTGCTGTT TGCCACCGAT
TCCTTCTGGG AGGGAGTCGA TGTGCCGGGG CGTTCTCTGG AGCAGGTGAT CATTACCCGG
CTGCCTTTCA AAGTTCCCAC CGAACCGGTG CTGGAAGCTC GCGCCGAGGC GATCAGCGCT
GCCGGTGGCG ATCCGTTTAT GCAATACACC GTGCCCCAGG CGGTCATCAA GTTCAAGCAG
GGCTTCGGGC GATTGATCCG CCATCGCGAG GATCGGGGCG TGGTCCTGAT TCTTGACAGC
CGGGTGGTAA AAAAGGGTTA CGGGCGGATT TTTTTGCGCT CCCTTCCCGA TGTGCCGGTG
GCCAAAGGTG GTACCGAAGA GGTCATGGGC GCGTTGGCCG ATTTTTTGCG GCCGACCACA
CAAGCCGAGC GACAGCCGCT ACCCGAGGCC CCGTAA
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| Protein sequence | MEKTFTSQVI EVMRQAIAAA DGREVFFQGR TDADLRVVQV QVLARGNGSA VPAIVQECRY
GDVVIHNHPS ACLEPSMADL EIASRLGSQG VGFLIVDNPV ENVYKVVEPF APREPRHLPP
EKIDALLGPN GVVAKTLSGY EERPEQLRMA FAVGEAFNRG QLAVIEASTG TGKSLAYLVP
ALLWALANEE RVVVSTNTIN LQEQLIRKDL PFLQRAAGLD FRAVLVKGRN NYLCRRRAET
ARLEPGLFDA ELSGELTAIL EWAAASHEGS REELTFLPRS EVWEEVRCEA DQCARVKCHH
YGACFFHKAR RQAAQADLLV VNHALLLSDL ALRHQTDNYS TAAVLPPFDR IVLDEAHHLE
DVATRYFASQ VTRYAFARVL GKLRHLRKPD KGVLPRFINA LARELPDTED VMYRRFYEAV
EALSGSSHAL YEKALQTLEG IGLDLATAHG TRVGAEELRR RVIPEMRESA FWSSAVERIR
ELAGASEEMA QALEALLKDS ETLPEAVADK LVSPLTDLRG IADRLEAIAA DLRFFIARDD
STCAWFEVVE GRIGRGRGVI TRLCTAPLDV AGQLKEGLYD RFRSVVLTSA TLAVGESFQY
LKSRVGLDRV ETGRVRELLL HSPFDFSSQA LVVVPTDVPE PGRSGYPAMV RDLTERAVVA
ADGRTFALFT AYGLLRQVYG ELAPVLQARG YRCLRQGEAN RHRLLKSFAE DETSVLFATD
SFWEGVDVPG RSLEQVIITR LPFKVPTEPV LEARAEAISA AGGDPFMQYT VPQAVIKFKQ
GFGRLIRHRE DRGVVLILDS RVVKKGYGRI FLRSLPDVPV AKGGTEEVMG ALADFLRPTT
QAERQPLPEA P
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