Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0020 |
Symbol | |
ID | 3723410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 22285 |
End bp | 23178 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637749599 |
Product | nucleoside-diphosphate-sugar epimerases |
Protein accession | YP_355453 |
Protein GI | 77917638 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000000000112867 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGGTTT TCGTAACGGG GGCAACCGGG TTTGTCGGTC ATGAGGTTAT CCGGCAGTTG CTGGCTGCCG GACATCGGCC GGTTTGCCTG GTGCGGCCCG GCTCGGAGGG GAAATTACCG CCGGCGGTCG ACGAGATCCG TGAGGGCGAC GTCACGCGGC CGGAAAGCTT ACGGGGGGCA CTGGCGGGAT GTGAGGCCGT GGTGCATCTG GTGGGCATTA TTCGCGAATA TCCCCGGCAG AAGGTAACCT TCGATCGTTT GCATCGCCAG GCAACGGCGC ATATGCTGAG CGCCGCCAAA GCGCAGAAAG TCCAACGTTT CGTACTGATG AGCAGCAACG GCGCCGAAGC GGAGGGCAGT ACCGCATATT ATCGCAGCAA GTGGAAGGCC GAACAGCTGC TTAAGGCCTC GTCCCTGGAT TGGACCATTT TCCGGCCTTC GGTCATGTAC GGTGCGGAGG ACAATTTCTG TACCCTGCTG GCAAGCATGG TGCGCATTCT GCCGGTGGTA CCGGTGTTCG GTGACGGTTG CTATCGTATC GCGCCGGTAG CGGTGCAAGA TGTCGCCGCC ACTATCGTTG CCAGTCTTGC GCGGCCCGAT GCCTGTGGCA GGAGTTTTGC CTGTTGCGGC GATCAGATGG TGACGTTCGA TGAACTGCTG GATATTATCG GTGGCGTTTT GCGGCGGCGC AACGTGGTCA AGGTGCACCA GCCGCTGTGG CTTGTCAAAC CGCTGCTGGC GCGACTGCAG TCCTTGCCGG GCTGTCCGCT GACCGTTGAA CAGTTGCAGA TGCTACTGCA CGGCAATGTC TGTGATCCTC AGCCCTGGAA AACCTTTTTC GGTCTCAGCA ATCGCTCTCT GGCGGATGGT TTGAAGCGCG CCCTCGGGCG CTGA
|
Protein sequence | MRVFVTGATG FVGHEVIRQL LAAGHRPVCL VRPGSEGKLP PAVDEIREGD VTRPESLRGA LAGCEAVVHL VGIIREYPRQ KVTFDRLHRQ ATAHMLSAAK AQKVQRFVLM SSNGAEAEGS TAYYRSKWKA EQLLKASSLD WTIFRPSVMY GAEDNFCTLL ASMVRILPVV PVFGDGCYRI APVAVQDVAA TIVASLARPD ACGRSFACCG DQMVTFDELL DIIGGVLRRR NVVKVHQPLW LVKPLLARLQ SLPGCPLTVE QLQMLLHGNV CDPQPWKTFF GLSNRSLADG LKRALGR
|
| |