Gene Pcar_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0015 
SymbolatpB-1 
ID3723405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp18392 
End bp19096 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content53% 
IMG OID637749594 
ProductATP synthase F0, A subunit 
Protein accessionYP_355448 
Protein GI77917633 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000000326077 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCATC CTTTTTTGTT TCTCAAGTGG CTGGTTGAAC ATTTTACCCA AGGCACAAGC 
CTGGAAAACC TGGAGCACTA CGGTTTTTTG GTGCATGTCA CCCATGCCTG GTTGATCATG
TTGTTGCTGA CGGGGGTAGC GCTGCTGCTG AAGCGCCGGC TGTCAGAGGT TCCCGGCGGG
TTGCAGAATC TGGTTGAAAT CGTTCTGGTG GAGCTGGGAC GCCTGGCCGA TGAAACCATG
GGTCCCAAGG GCCGTCGCTA TTTTCCCCTG ATTGCCACGT TGGCACTGTT TATCCTGTTT
TCCAATCTTA TTGCCCTGAT ACCGGGGTTT GCTCCCCCGA CGGCCAATCT CAATACCAAT
GCCGCACTGG CGCTGGCGGT TTTTGGCATG ACCCATGTCG TGGGAGTCCG AGAGCACGGG
CTAAAATATT TTAAACATTT TGTGGGGCCC GTATGGTGGT TGGCACCGTT GATTCTGCCG
ATTGAAATCA TCGGGCATCT GGCGCGTCCC CTGTCGTTGG CGCTGCGTCT TTTCGGTAAT
ATGTACGGGC ATGAAATCGT ACTGGTTATT TTCTTTACCC TGGTACCGCT GCTGTTACCT
ATTCCCATGA TGCTGATGGG GATTTTGGTG GCGTTTATCC AGACGTTTGT GTTTACCCTG
CTGGCCATGA TTTATATCGC CGGGGCTCTG GAGGAAGCAC ACTGA
 
Protein sequence
MTHPFLFLKW LVEHFTQGTS LENLEHYGFL VHVTHAWLIM LLLTGVALLL KRRLSEVPGG 
LQNLVEIVLV ELGRLADETM GPKGRRYFPL IATLALFILF SNLIALIPGF APPTANLNTN
AALALAVFGM THVVGVREHG LKYFKHFVGP VWWLAPLILP IEIIGHLARP LSLALRLFGN
MYGHEIVLVI FFTLVPLLLP IPMMLMGILV AFIQTFVFTL LAMIYIAGAL EEAH