Gene Pcar_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0009 
Symbolnth 
ID3723399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp11641 
End bp12291 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content56% 
IMG OID637749588 
Productendonuclease III 
Protein accessionYP_355442 
Protein GI77917627 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000000000385159 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAAA AAAAACAGCT GGCAGAAATG CAGGAAGTCA TCCGTATTCT CGAGCAGCTC 
TATCCGGAGG CTCATTGCGC CCTGAATTTT GAAAATCCCT GGCAGTTGCT GGTGGCGACC 
ATTTTATCGG CACAGTGTAC GGATCGGCAG GTAAACATCG TGACGCGCGA ACTGTTTGCG 
CGCTTTACGG ATGCGCAAAG CCTGGCTACA GCCCGACCCG AAACGATCGA AGATATCATT 
CGCAGTACCG GCTTTTTCCG CAATAAGGCC AAAAATCTCA TCGGCTGCGC GGCCGCCGTG 
GTCGACCGGC ATGGCGGCCA GGTTCCGCAA ACCATAGAGG ATCTGGTTGC TCTGCCCGGA 
GTGGGGCGCA AAACCGCCAA TGTGGTGCTG GGCAATGCCT TTGACATTCC CGGGCTGCCT 
GTCGACACCC ATGTCAAAAG GTTGGTGCGA CGTCTGGGCT GGAGCCAGGA GCGCGATCCG 
GTACGTATCG AACGGGAGCT GTGTCAGCTG TTGCCGCCAC CCAGCTGGAC CCAGACCAGT 
CATTTACTCA TCCATCATGG TCGTTCCCTG TGTAAAGCCC AGCGTCCATT ATGCAGTCGA 
TGTCCGGTAC AGCCTGTTTG CCCCCGCATC GACGTTAAAA ACAGTCTCTG A
 
Protein sequence
MAQKKQLAEM QEVIRILEQL YPEAHCALNF ENPWQLLVAT ILSAQCTDRQ VNIVTRELFA 
RFTDAQSLAT ARPETIEDII RSTGFFRNKA KNLIGCAAAV VDRHGGQVPQ TIEDLVALPG 
VGRKTANVVL GNAFDIPGLP VDTHVKRLVR RLGWSQERDP VRIERELCQL LPPPSWTQTS 
HLLIHHGRSL CKAQRPLCSR CPVQPVCPRI DVKNSL