Gene Pcar_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0003 
SymbolrecF 
ID3723393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp2856 
End bp3947 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content50% 
IMG OID637749582 
ProductDNA replication and repair protein 
Protein accessionYP_355436 
Protein GI77917621 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.0241212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTGA CACGAATCAT TCTGCACAAT TATCGTAATA TAGAAGCCGC GGAGTTATGC 
CCGGAGGAAA ACTTTAATCT TCTTTGTGGA GATAACGCCC AAGGCAAGAC CAACACCCTG 
GAAGCGATTT ATCTTTTAGG TCATTTCAAA AGTTTTCGCC GGGGACGCAA CGAAGAACTG 
ATTGGCTCAG CTGACCGACA TACCCGGGTT CAGGGAGAAT TTCTACGCGA TGGTCTGCGC 
GAAACGGTCA GTATCACCAT AACCGGCGAT AAAAAAAATA TCGAGATCAA CGGCAAGCGG 
CCGCGCCAAA GCAATGAGAT GTTCGGCCGT TTTCCATCGG TACTGTTTGC ACCGGAAGAG 
GTTAGTCTGC CCAAAGGTTT TCCGGCGGGA CGTCGTGCTT TGCTGGATCG GGCCTTATGT 
CAGACCAGGC CTTCTTTTCT CGATCACGCA CGGGCTTATC AGCGCTGTTT GCGGCAGCGG 
AACATTCTGT TGAAAAGTGG CGCCGCAGCT CCGATAGTAC TGCCTTGGAC TGAAGAGTTG 
ATACAGACCG GGGCCATGGT GCGTTTGGCT CGTCGCCGTT ATCTCGATCG GCTGTTGCCG 
TTGTTGCGCG ACATTTACCG GGAAATCTGC TCCGGCAGGG AATCTGTCAA TCTGGTCTAT 
CCCTCTGAAT CCGATAATCT CTCGGATTTA AAGGAGGAAT TGCGCAGTAA TCTGGAACGG 
GAACAAAGCC GGGAAACAAA ATATGGCATG ACCATGGTCG GTCCGCATCG TGATGATCCT 
GTCTTTATGG TGGATGATCG GGTTTTAGGA CTCTACGGTT CGCAGGGCCA GCAACGCTCG 
TTTATTCTGG CCTTCAAAAC CGCTCAGATT ATCGATCTGG AAAAAGAGAC AGGGTATACG 
CCGTTGCTTT TACTGGACGA CATGACCAGT GAATTGGATC GCAAACGGCA GGATTACTTT 
TTCCGGTTTT TACACCAAAG ACAAGGCCAG GTGTTTATTA CCTGCACGGA ACTATCTCCG 
TTACAAAACG CGGGATTCAA TCGCATGCGA ACTTTTCGAG TCCGAGAGGG AAAACTTTGC 
GATTACCAAT AA
 
Protein sequence
MILTRIILHN YRNIEAAELC PEENFNLLCG DNAQGKTNTL EAIYLLGHFK SFRRGRNEEL 
IGSADRHTRV QGEFLRDGLR ETVSITITGD KKNIEINGKR PRQSNEMFGR FPSVLFAPEE 
VSLPKGFPAG RRALLDRALC QTRPSFLDHA RAYQRCLRQR NILLKSGAAA PIVLPWTEEL 
IQTGAMVRLA RRRYLDRLLP LLRDIYREIC SGRESVNLVY PSESDNLSDL KEELRSNLER 
EQSRETKYGM TMVGPHRDDP VFMVDDRVLG LYGSQGQQRS FILAFKTAQI IDLEKETGYT 
PLLLLDDMTS ELDRKRQDYF FRFLHQRQGQ VFITCTELSP LQNAGFNRMR TFRVREGKLC 
DYQ