Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0001 |
Symbol | dnaA |
ID | 3723011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 72 |
End bp | 1430 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637749580 |
Product | chromosomal replication initiation protein |
Protein accession | YP_355434 |
Protein GI | 77917619 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 3.98376e-16 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCATGG AAAAAATCTG GCAAAAGACT CTGGATAGCC TTAAGCAATC CTTGACCCCG CAGCATTTTG CGACATGGAT CAAGCCGATT CGCTTCATCG GCGTACATAA CGATGTGGTG GAACTCGAAG TACCGAACCG GTTTGTCCTC GACTGGTTAA AGAAACATTA TTACGGAACT ATTCAGGAAT GTTGGTCGAA TACGGCAGGG GCGGCCTATA AAATAAGCCT TACCGTTGCC AGTAAAACCG CCAAAGAGCC TGTTCCCGCC GCTGAAACCA GTCCCCCCGC AACCCCGGCG CCAAAACCGA AACAGGAAAA AACACCACCG CGAGCCAATG CCTACAACCT GAATTCGCGA TATACCTTTG AAACCTTTGT TCTTGGTTCT TCCAACCAAT TCGCCAGCGC GGCGGCCACA GCGGTAGCTA ATAATCCTGC CACGACCTAC AACCCCTTAT TTATTTACGG AGGGGTCGGT CTGGGAAAAA CCCATCTTGT CAATGCCGTG GGAAATGCCA TTCTGAAAAA AAATCCGGAA ATGAAGGTGT GTTACTACAC TTCCGAAAAA TTCATGAATG AGCTGATCAA CTCACTCCGC TATGCAAAGA TGGATGAGTT TCGCACCAAA TTCAGATCTA TGGACGTGTT ACTGATTGAC GACGTTCAAT TTATTGCAGG AAAAGAACGT ACTCAGGAAG AGTTCTTCCA TACCTTTAAC GCGTTATACG ACTCCCATAA ACAGATTGTT GTAACATCCG ATAAATTTCC CAAAGAAATA CCCGGCCTAG AAGAAAGACT GAGATCACGA TTTGAATGGG GATTGATTGC CGATATTCAA GCCCCGGACA TGGAAACAAA ACAAGCTATT CTTAAAATGA AAGCTGAACA GAACGGTATA GATCTACCCA AGGAAGTAGC TTTATTTTTG GCAAGCGCGG TAAGTAGCAA CATTCGTGAA CTCGAAGGTT ACCTGGTACG TATTGGTGCT TACGCAAGTC TCACAGCTAC TCCCATCACC TTAAGTATGG CCCAGGAAGT GCTTAAGGAC ATTCTGGTGG AAAAACGCCG AGAACTAACC GTTGAAGAGA TTCAAAAACT GGTGGCTACT CACTACTCCA TCAAAATATC GGATCTTAAG TCAGCCAAGC GCATGAAAGC CTTGGTATTA CCGCGCCAGA TAGCCATGTA TCTTTCCCGT CAGCTGACGT CCTGTTCCTA TCCGGAAATC GGAGAACGCT TCGGCGGAAA GGACCATTCC ACAATCATTC ATGCGATTAA AAAAATTGAA AAAGCCATGG ATGAAGATTA CCAGCTCCGT TCGGTTATCA ACAATTTGAA AAAAGAGCTA AGCATCTAA
|
Protein sequence | MSMEKIWQKT LDSLKQSLTP QHFATWIKPI RFIGVHNDVV ELEVPNRFVL DWLKKHYYGT IQECWSNTAG AAYKISLTVA SKTAKEPVPA AETSPPATPA PKPKQEKTPP RANAYNLNSR YTFETFVLGS SNQFASAAAT AVANNPATTY NPLFIYGGVG LGKTHLVNAV GNAILKKNPE MKVCYYTSEK FMNELINSLR YAKMDEFRTK FRSMDVLLID DVQFIAGKER TQEEFFHTFN ALYDSHKQIV VTSDKFPKEI PGLEERLRSR FEWGLIADIQ APDMETKQAI LKMKAEQNGI DLPKEVALFL ASAVSSNIRE LEGYLVRIGA YASLTATPIT LSMAQEVLKD ILVEKRRELT VEEIQKLVAT HYSIKISDLK SAKRMKALVL PRQIAMYLSR QLTSCSYPEI GERFGGKDHS TIIHAIKKIE KAMDEDYQLR SVINNLKKEL SI
|
| |