Gene RSP_3744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3744 
Symbol 
ID3721503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007494 
Strand
Start bp869686 
End bp870345 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID640073414 
ProductABC amino acid transporter, inner membrane subunit 
Protein accessionYP_355251 
Protein GI77465748 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCT CTCTTCTCCA GGATATCGCG GCCTACGGAC CGGGCTTTCT CAAGGCCGCC 
TGGCTCGTCC TGTGGCTGAC GCTGCTCACC ATCCTCGTGA GCTGGGCCTG CGGCCTGCTG
GCCGCGCTCG CCCAGCGGTC CGAGCTGCGT CTCGTGCGCG GCGCCGCCGC CTTCTACATC
TGGTTCATCC GCGGCACGCC CGCCCTCATC CAGATCTTCA TCATCTATTT CGGCCTGCCG
CAGCTCGGCC TGCGCCTGTC GCCCTTCACC GCGGGCGTCA TCGCGCTCGG CATCAACTCG
GGCGCCTATG TGGCCGAGAT CGTCCGCTCG GGCCTCTCGG CCATCCACCG CGGCCAGACC
GAGAGCGCGC TGGCGCTGGG CTTCAGCCAG AGCCAGACCA TGCGTACCAT CGTGCTGCCG
CAGGTCTTCC GCATCATCCT GCCCTCGATC ACCAACGAGG CGATCTCGAC GCTGAAGAAC
ACGTCGCTTC TGTCCACGAT CACGGTGGTC GAGCTCACGC TCTATGCCCA GACCCTGATC
TCGGCGACCT TCCGGCCCTT CGACTTCTAC ATCGCCGTGG CCGTCATCTA TCTTGTCCTC
ACCACGGTGC TCACCCAGAT CGCGAACTGG GCCGAGCGGC GCTACGCAAG GCTGAGCTGA
 
Protein sequence
MNGSLLQDIA AYGPGFLKAA WLVLWLTLLT ILVSWACGLL AALAQRSELR LVRGAAAFYI 
WFIRGTPALI QIFIIYFGLP QLGLRLSPFT AGVIALGINS GAYVAEIVRS GLSAIHRGQT
ESALALGFSQ SQTMRTIVLP QVFRIILPSI TNEAISTLKN TSLLSTITVV ELTLYAQTLI
SATFRPFDFY IAVAVIYLVL TTVLTQIANW AERRYARLS