| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3585 |
|---|
| Symbol | |
|---|
| ID | 3722102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | - |
|---|
| Start bp | 678504 |
|---|
| End bp | 679733 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640073251 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_355089 |
|---|
| Protein GI | 77465586 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.855143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGG ACGGCATCAA CAGCTACATG ACCGGCCCCG ACGAGCAGGG TCGTTTCGGC
ATCTTCGGCG GACGCTTCGT GTCCGAGACG CTGATGCCGC TGATTCTCGA TCTCGAAGCG
CGCTATGAAC ATGCCAAGAC CGACCCGGAT TTCTGGGCCG AGATGGACGA CCTGTGGAAG
AACTACGTCG GTCGTCCCTC GCCGCTCTAT TTCGCGCCGC GGCTGACCGA GCATCTCGGC
GGGGCGAAGA TCTATCTCAA GCGCGACGAG CTGAACCATA CCGGCGCGCA CAAGATCAAC
AATGTGCTGG GCCAGATCAT CCTCGCCCGC CGCATGGGCA AGACCCGGAT CATCGCCGAG
ACGGGCGCGG GCCAGCATGG CGTGGCGACG GCGACGGTCT GCGCCAAGTT CGGGCTGAAA
TGCGTGGTCT ACATGGGCGC GCACGATGTC GAACGGCAGG CGCCGAACGT GTTCCGCATG
CGGCTGCTGG GCGCCGAGGT GGTGCCGGTG ACCTCCGGGC GCGGCACGTT GAAGGATGCG
ATGAACGACG CGCTGCGCGA CTGGGTCACC AACGTGCGCG ACACCTTCTA CTGCATCGGC
ACCGTGGCGG GCCCGCATCC CTATCCGGCG ATGGTGCGCG ACTTCCAGTC GATCATCGGC
CGCGAAGTGC GCTGGCAGCT GGCCGAGCAG GAAGAGGGCC GCCTGCCCGA CACGCTCGTG
GCCGCCATCG GCGGCGGGTC GAACGCCATG GGGCTGTTCC ATCCGTTCCT CGACGATCCG
TCGGTGCGGA TCGTCGGCGT CGAGGCCGGA GGCAAGGGCG TCGACGACCG GATGGAACAT
TGTGCCTCGC TGACCGGCGG ACGTCCGGGC GTGCTGCACG GCAACCGGAC CTATCTGCTG
CAGGATGCCG ACGGCCAGAT CCTCGAGGGC TTCTCGATCT CGGCCGGGCT CGACTATCCG
GGCATCGGGC CCGAACATGC ATGGCTCCAT GACACGGGCC GGGCGGAATA TGTCTCGATT
ACCGATGCCG AGGCGCTGGA GGCGTTCCAG CTCTGCTGTG CGCTCGAAGG GATCATTCCC
GCGCTCGAGC CGTCGCACGC GCTGGCCCAT GTCATCAAGA TCGCGCCGAC GCTGCCGCGC
GACCATATCA TCGTGATGAA CATGTGCGGG CGGGGCGACA AGGACATCTT CACCGTGGCG
AAGCATCTGG GCTTCGACAT GAAGATCTGA
|
|---|
| Protein sequence | MAEDGINSYM TGPDEQGRFG IFGGRFVSET LMPLILDLEA RYEHAKTDPD FWAEMDDLWK
NYVGRPSPLY FAPRLTEHLG GAKIYLKRDE LNHTGAHKIN NVLGQIILAR RMGKTRIIAE
TGAGQHGVAT ATVCAKFGLK CVVYMGAHDV ERQAPNVFRM RLLGAEVVPV TSGRGTLKDA
MNDALRDWVT NVRDTFYCIG TVAGPHPYPA MVRDFQSIIG REVRWQLAEQ EEGRLPDTLV
AAIGGGSNAM GLFHPFLDDP SVRIVGVEAG GKGVDDRMEH CASLTGGRPG VLHGNRTYLL
QDADGQILEG FSISAGLDYP GIGPEHAWLH DTGRAEYVSI TDAEALEAFQ LCCALEGIIP
ALEPSHALAH VIKIAPTLPR DHIIVMNMCG RGDKDIFTVA KHLGFDMKI
|
|---|
| |