Gene RSP_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3554 
SymbolxdhA 
ID3721968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007494 
Strand
Start bp646688 
End bp648145 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content73% 
IMG OID640073218 
Productxanthine dehydrogenase, small subunit 
Protein accessionYP_355056 
Protein GI77465553 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A 
TIGRFAM ID[TIGR02963] xanthine dehydrogenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAGA TCGCGTTCAT CCTGAACGGA ACGCCCCTCA GCGTCGCGGC GGAGCCCACC 
CGGACGCTGC TCGACTTCCT GCGCGAGGAC CGCGGGCTCA CCGGCACCAA GGAGGGCTGC
AACGAGGGCG ACTGCGGCGC CTGCACGGTG ATGGTGACCG ACGAGACCGG GCCCCGCGCG
CTGAACGCCT GCCTCCTGTT CCTGCCCCAG CTTCAGGGCA AGGAGGTCCG GACTGTCGAG
GGCCTCGCCG CGCCCGACGG CCGCCTCCAT CCGGTGCAAC AGGCGCTGAT CGACCATCAC
GGCTCGCAAT GCGGCTTCTG CACCCCGGGC TTCGTCATGT CGATGGCCGC GGCCCATGCC
ACCGGCTGCC GCGACCATGA CGATACGCTC GCGGGCAACC TCTGCCGCTG CACGGGCTAT
GCTCCCATCG TCCGCGCCGC CCGCGCCGCC GAGGAGGCGC CTCCGCCCGA CTGGCTGCCC
TCTTTCACTC TGCCTCAAAT ATCCTCGGGG GGGACCGTGA GCGGCGAGAG CCCCTCCCCC
GGAGGGGCGG CCGCGAACGC CCGCCCCGCG GGCGGGCCCG GGGGGGCAGA CAGCCCCCCC
GCAGCCGGTT GCCGCCCGAC CAGCCTCGAG GAGCTCGCGC GGCTTTACGA GGCCCATCCC
GAGGCCACGC TGATCGCAGG CGCCACCGAC GTGGGCCTCT GGGTCACCAA GGATCTGCGC
GACCTGTCGA TGCCCCTCTT CCTCGGCGCC ATCCCCGAGT TGCGCCGCAT CGAGGAGGCG
GCGGGCAGTC TGCGTGTCGG GGCCATGGTC ACCATCTCGG ACCTGCGCGC GGCACTTGCC
CCCCGCCTGC CGGGCCTCGC GGACCTGCTG CGCCGCTTCG CCAGCGTGCA GATCCGCAAC
GCGGCCACCC TCGGCGGCAA TATCGCCAAC GGCTCGCCCA TCGGCGACAC GCCGCCTGCG
CTGATCGCGC TCGGCGCCAC GCTGCACCTG CGCCGGGGCG AGACCCGCCG CGACCTGCCG
CTCGAGGAGT TCTTCCTCGA TTACCGCAAG CAGGACCGGC GCCCGGGCGA GTTCGTCGAG
GCGGTCACGA TCCCCACCGA GGCACCGGGG CTGCGCTGCT ACAAGCTCTC GAAACGGTTC
GATCAGGACA TTTCGGCGGT CTGCGGCTGT TTCAACATCT CGGTCGAGGC GGGCCGCGTC
GCGGCGGCCC GCCTGGCCTT CGGCGGCATG GCCGGGATCC CGAAGCGCGC GGCGGCGGTC
GAGGCGGCGC TTCTGGGCCG CCCCTGGACC CTCGCCACGA TCGAGGCGGC CCGCCCGGCC
TTCGCCGAGG ATTTCACCCC GCTCTCCGAC ATGCGCGCCT CGGCCGGCTA CCGTCTCGAG
GCCGCGGCGG CGCTTCTCGT CCGCGCCTTC CACGATCTTC AGGGCCACCC CGTCTCGGTG
CTGGAGGTGG AGGCATGA
 
Protein sequence
MTEIAFILNG TPLSVAAEPT RTLLDFLRED RGLTGTKEGC NEGDCGACTV MVTDETGPRA 
LNACLLFLPQ LQGKEVRTVE GLAAPDGRLH PVQQALIDHH GSQCGFCTPG FVMSMAAAHA
TGCRDHDDTL AGNLCRCTGY APIVRAARAA EEAPPPDWLP SFTLPQISSG GTVSGESPSP
GGAAANARPA GGPGGADSPP AAGCRPTSLE ELARLYEAHP EATLIAGATD VGLWVTKDLR
DLSMPLFLGA IPELRRIEEA AGSLRVGAMV TISDLRAALA PRLPGLADLL RRFASVQIRN
AATLGGNIAN GSPIGDTPPA LIALGATLHL RRGETRRDLP LEEFFLDYRK QDRRPGEFVE
AVTIPTEAPG LRCYKLSKRF DQDISAVCGC FNISVEAGRV AAARLAFGGM AGIPKRAAAV
EAALLGRPWT LATIEAARPA FAEDFTPLSD MRASAGYRLE AAAALLVRAF HDLQGHPVSV
LEVEA