| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3551 |
|---|
| Symbol | hisS |
|---|
| ID | 3721965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | - |
|---|
| Start bp | 641093 |
|---|
| End bp | 642577 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640073215 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_355053 |
|---|
| Protein GI | 77465550 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.340591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG ACAAGGCTTC CCGCCGCCCG CGCGCGGAAA CGCCCAAGGG CTTCCGCGAC
TATTTCGGTG CGGATGTGAC CGAGCGCAAG GCGATGCTCG ACGCCGTGGC CGAGGTCTAC
CATCGCTACG GCTTCGATCC GCTGGAAACC TCGGCCGTCG AGACCGTCGA GGCGCTGGGC
AAGTTCCTGC CCGATGTGGA TCGCCCGAAC GAGGGCGTCT TCGGCTGGCA GGACGAGGAT
GGCGACTGGC TCGCGCTGCG CTACGATCTG ACGGCGCCGC TGGCGCGGGT CGCGGCGCAG
TTCCGCAACG ACCTGCCGAG CCCCTACCGG CGCTATGCGA TGGGCCCGGT CTGGCGCAAC
GAGAAGCCGG GGCCGGGGCG GTTCCGCCAG TTCTATCAAT GCGACGCGGA TACGGTGGGG
TCGGCGAGCG TCGCGGCCGA TGCCGAGATC TGCGCCATGC TGTCGGACGC GCTCGAAGTC
GTGGGCATTC CCCGCGGCGA CTATATCGTG CGGGTGAACA ACCGGAAGGT CCTGAACGGG
GTGATGGAGG TGGCGGGCGT GCTCGACCCG TCCGACCCGG CGAAGTTCGA GGCCGAGCGC
GGCATCGTGC TCCGCGCCAT CGACAAGATC GACCGGCTGG GTGAGACGGG CGTGCGCGCA
CTGCTGGGCT CGGGCCGCAA GGACGAGAGC GGCGATTTCA CCAAGGGCGC GGGGCTCTCG
GACGAGCAGG CCGAGGTGGT CATGGGCTTC ATGGCCGCCA GGCGCGACAC GGGCGCGGCG
ACGGCTGCGC GGCTGCGCGA GCTGGTGGGG GCCTCGACCC TCGGGTGCGA GGGCGTGCAG
GAGCTCGAAA CCATCGCCGA ACTGCTTGAC GTGCAGGGCT ACGGGCCCGA CCGGATCGTG
GTGGATCCGT CGGTGGTGCG GGGCCTCGGC TATTATACCG GCCCGGTGTT CGAGGCCGAG
CTTACCTTCG AGATCCTCGA CGAGAAGGGC CGCAAGCGGC AGTTCGGCTC GGTCGCGGGC
GGCGGGCGCT ATGACGATCT GGTCAAGCGC TTCACCGGCC AGTCGGTGCC GGCGACCGGC
GTCTCGATCG GGGTCGACCG GCTGCTGGCG GCACTGCGCG CCAAGGGTCG TGCGGGGGCC
GAGGCGCAGG GGCCGGTGGT GGTGACCGTC ATGGACCGCG ACCGGATGGG CGACTACATG
GCCATGGTGG GCGAGTTGCG CCGCGCGGGC CTCCGGGCCG AACTCTATCT CGGCAATCCG
AAGAACTTCG GCAACCAGCT GAAATATGCG GATGCGCGGA AGTCTCCGGT GGCGGTCATC
CAGGGGTCGG ACGAGGCCGC GCGCGGGGTC GTGGTGCTGA AGGATCTGGT GCTCGGCGCG
CAGATCGCGG CCGGCGCGAG CCTCGAGGAA TGGAAGAGCC GGCCAGCGCA GGTCGAGGTG
CCGCGGGCGG ATCTCGTCCG GGCGGTGCAG GACATGCTCT CGTGA
|
|---|
| Protein sequence | MAKDKASRRP RAETPKGFRD YFGADVTERK AMLDAVAEVY HRYGFDPLET SAVETVEALG
KFLPDVDRPN EGVFGWQDED GDWLALRYDL TAPLARVAAQ FRNDLPSPYR RYAMGPVWRN
EKPGPGRFRQ FYQCDADTVG SASVAADAEI CAMLSDALEV VGIPRGDYIV RVNNRKVLNG
VMEVAGVLDP SDPAKFEAER GIVLRAIDKI DRLGETGVRA LLGSGRKDES GDFTKGAGLS
DEQAEVVMGF MAARRDTGAA TAARLRELVG ASTLGCEGVQ ELETIAELLD VQGYGPDRIV
VDPSVVRGLG YYTGPVFEAE LTFEILDEKG RKRQFGSVAG GGRYDDLVKR FTGQSVPATG
VSIGVDRLLA ALRAKGRAGA EAQGPVVVTV MDRDRMGDYM AMVGELRRAG LRAELYLGNP
KNFGNQLKYA DARKSPVAVI QGSDEAARGV VVLKDLVLGA QIAAGASLEE WKSRPAQVEV
PRADLVRAVQ DMLS
|
|---|
| |