| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3536 |
|---|
| Symbol | |
|---|
| ID | 3721950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | + |
|---|
| Start bp | 619190 |
|---|
| End bp | 620389 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640073200 |
|---|
| Product | beta-ketoadipyl CoA thiolase |
|---|
| Protein accession | YP_355038 |
|---|
| Protein GI | 77465535 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGG TCTTCATCTG CGACTATATC CGCACGCCCA TCGGCCGCTA CGGCGGGGCG
CTCTCCCCGG TCCGGGCCGA CGATCTGGGC GCCGTGCCCC TCAAGGCCCT GATGGCCCGC
AATGGCGGGG TGGACTGGGA GGCCGTGGAC GATGTGATCT TCGGCTGCGC CAATCAGGCG
GGCGAAGACA ACCGCAACGT GGCCCGCATG TCGGCGCTGC TGGCGGGGCT GCCGGTGGGT
GTCACGGGCA CGACGATCAA CCGGCTGTGC GGCTCGGGCA TGGATGCCGT GCTGACCGCC
GCCCGCCAGA TCGCCGCGGG TGAGGCGGAT CTCGTGATCG CGGGCGGGGT GGAGAGCATG
TCGCGCGCGC CGTTCGTGCT GCCGAAGGCG GGAACGGCCT TCACGCGCTC GGCCGAGATC
CATGACACGA CGATCGGCTG GCGCTTCGTC AATCCGGCGA TGGAGGCGGC CTACGGGGTG
GATCCCATGC CGCAGACCGG TCAGAACGTC GCCTGCGACT TCGGCATCAG CCGTGAAGCG
CAGGATGCCA TGGCCCTCGC CTCGCAGACG AAGGCGGCGG CGGCGCAGGC GAACGGGCGG
CTCGCACAGG AGATCACGCC GGTCCTCGTT CCGCAGCGCC GGGGCGAGCC GGTCCGGGTG
GAGCAGGACG AGCATCCGCG GGCGACGACG CCGGAGGCGC TTGCCAAGCT GAAGCCGCTC
TTCGCCGGCG GATCCGTCAC GGCGGGCAAT TCCAGCGGCG TCAACGACGG CGCGGCGGCC
CTGATCCTCG CCAGCGAGGC GGCGGTCCGG CGCCACGGGC TTACCCCCAT GGCGCGGGTG
CTGGGCGGCG CCACCGCGGG CGTGCCTCCG CGCATCATGG GCATAGGCCC GGTGCCCGCC
ACCCGCAAGC TGATGGCCCG GCTCGGACTG ACCACGGAGG CTTTCGACGT GATCGAGCTG
AACGAGGCCT TCGCCGCGCA GGGGGTGGCC ACGCTCCGGC AGCTCGGCAT CGCCGAGGAG
GATGCGCGGG TGAACCCCAA CGGCGGCGCC ATCGCCCTCG GCCACCCGCT GGGCATGTCG
GGCGCCCGCA TCACCGGCAC GGCGGCGCTC CAGCTGCAGC GCACGGGCGG GCGGCGGGCA
CTCTCGACCA TGTGCATCGG TGTGGGTCAG GGCATCGCCA TCGCGCTGGA ACGGGTCTGA
|
|---|
| Protein sequence | MTQVFICDYI RTPIGRYGGA LSPVRADDLG AVPLKALMAR NGGVDWEAVD DVIFGCANQA
GEDNRNVARM SALLAGLPVG VTGTTINRLC GSGMDAVLTA ARQIAAGEAD LVIAGGVESM
SRAPFVLPKA GTAFTRSAEI HDTTIGWRFV NPAMEAAYGV DPMPQTGQNV ACDFGISREA
QDAMALASQT KAAAAQANGR LAQEITPVLV PQRRGEPVRV EQDEHPRATT PEALAKLKPL
FAGGSVTAGN SSGVNDGAAA LILASEAAVR RHGLTPMARV LGGATAGVPP RIMGIGPVPA
TRKLMARLGL TTEAFDVIEL NEAFAAQGVA TLRQLGIAEE DARVNPNGGA IALGHPLGMS
GARITGTAAL QLQRTGGRRA LSTMCIGVGQ GIAIALERV
|
|---|
| |