| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3525 |
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| Symbol | |
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| ID | 3721940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 604763 |
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| End bp | 606370 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640073190 |
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| Product | ABC peptide transporter, periplasmic binding protein |
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| Protein accession | YP_355028 |
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| Protein GI | 77465525 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAT CGCACCACCT GCTGATGGAC GATCTGGTCA CGCGGCTGCG GCGCGGACAG
CTGTCGCGTC GCGAGTTTCT GGCCCGCAGT TCGGCGCTGC TGGCGGCCGG CGCCATGAGC
GGCCTGCCCG GTGCGGCGCT TGCCCAGCAG GCGGCACCGA AGGCCGGCGG CTTCATGCGG
CTCGGCCTGC ACAATGCCTC GCAGAACGAC AACCTCGATC CCGGCAGCTG GTCGACGAGT
TGGACCGGCG CCTCGTTCAA CGGCGGCGTC TACAACAACC TCGTCGAGAT CCTGCCCGAC
GGCTCGGTCG CGGGCGATCT GGCCGAGAGC TGGGAGGCGG AGCCCGGCGC GAAGGTCTGG
CGCTTCAAGC TGCGCTCGGG CGTGACCTTC CACAACGGCA AGAGCCTCGA GGCGGAAGAC
GTGCGCCAGT CGCTCGAGCA TCACATGAAG CCGGACTCGA CCTCGGGCGC GCGCGCCATC
GTCGAGCAGA TCGAGACCAT CGACATCGAA GGGTCCGACA CCGTCCGCAT CACCCTCTCG
GAGGGCAATG CCGACCTGCC CTACCTCCTG TCGGATTATC ACCTCTCGAT CTATCCGGCG
CTGGAGGGCG GCGGGATCGA CATGGAGAGC GCCAACGGCA CCGGCGCCTT CCTCCTCGAG
AGCTTCGAGC CGGGCATCGC CACCCGCCTC AAGCGGAACC CGAACTACCA CAAGAACAAC
AAGCCCTATC TCGACGAGGT CGAGTTCATC AACATCACCG ACGCCACGGC GCGGCTGAAC
GCGCTGCTGA CCGGCGAGGT CGATTTCATC CAGGATCTCG ACATCCGCAA CGTGGCGATG
GTCGAGCGCA GCGGCGATTT CTCGGTTCAG CGCGTGCCGA GCCTGCGCCA CTTCACCTTC
GACATGGACA CCCGCGTCGC GCCCTTCGAC AATCCCGATG TGCGGCTGGC GCTGAAATAT
GCGCTCGACC GGGATGACGT GATCGAGAAG GTGTTCCTTG GCGAGGCCAC GAAGGGGAAC
GACAACCCGG TCGCCTCGAT CCAGAAATTC TACCACGACA TGCCCGCGCG CGAATACAGC
ATCGCGAAGG CCAAGGAGCA TCTGGCCAAG GCCGGGCTCG ATCAGGTGAG CGTCGATCTG
TCGGTGGCCG AGAATGCGTT TGCGGGCGCC ATCGAGGCGG CGACGCTCTA CCAGCGCCAT
GCGGCCGAGG CCGGCATCAA CATCAACATC GTGCAGGAGG CGGCCGACGG CTACTGGGAG
AACGTCTGGC GCAAGAAGCC CTTCTGCGCG GTCGACTACT TCGGCCGCGC CACCGTCGAC
TGGCTGTTCT CGACGAGCTA TGTCACCGGC GCGCCGTGGA ATTCGGGCTG GTCGAACGCG
CGGTTCGACG AGCTGCACCA GACGGCGCGG GCCGAGACCG ACGAGGCCAA GCGCGCCGCC
TGCTACGCCG AAATGCAGGA GATCCTGCGC GACGACGGCA ACGTCATCAC CGTGGCCTTC
GTGAGCTGGC GCAACGCCGT CTCGAACCGC ATCGGCTTCG GCGAGGTCGG CGGGCTGATG
CCGCTCGACA ACATGCGGAT GTGCGAGCGC TGGTGGGTCA AGGACTGA
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| Protein sequence | MNKSHHLLMD DLVTRLRRGQ LSRREFLARS SALLAAGAMS GLPGAALAQQ AAPKAGGFMR
LGLHNASQND NLDPGSWSTS WTGASFNGGV YNNLVEILPD GSVAGDLAES WEAEPGAKVW
RFKLRSGVTF HNGKSLEAED VRQSLEHHMK PDSTSGARAI VEQIETIDIE GSDTVRITLS
EGNADLPYLL SDYHLSIYPA LEGGGIDMES ANGTGAFLLE SFEPGIATRL KRNPNYHKNN
KPYLDEVEFI NITDATARLN ALLTGEVDFI QDLDIRNVAM VERSGDFSVQ RVPSLRHFTF
DMDTRVAPFD NPDVRLALKY ALDRDDVIEK VFLGEATKGN DNPVASIQKF YHDMPAREYS
IAKAKEHLAK AGLDQVSVDL SVAENAFAGA IEAATLYQRH AAEAGININI VQEAADGYWE
NVWRKKPFCA VDYFGRATVD WLFSTSYVTG APWNSGWSNA RFDELHQTAR AETDEAKRAA
CYAEMQEILR DDGNVITVAF VSWRNAVSNR IGFGEVGGLM PLDNMRMCER WWVKD
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