Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3500 |
Symbol | |
ID | 3721917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 579125 |
End bp | 580141 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640073167 |
Product | ABC sugar transporter, periplasmic binding protein |
Protein accession | YP_355005 |
Protein GI | 77465502 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.12812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAGA CGGTGAGGCT GCTCGGCACG GTTGCCGCAG GACTGATGGC GGCCAATGTG GCGGCCGCGC AGGAGATCGC CTTCATCCCG AAGCTGGTCG GGGTGGGCTT CTTCACCTCG GGCGGCAACG GCGCGATGAA GATGGGCGAG GAGCTGGGCG TCAAGGTGAC CTACGACGGC CCGACCGAGC CCAGCGTCTC GGGGCAGGTC CAGTTCGTGA ACAACTTCGT CAATCAGGGC TACGGGGCCA TCGTGCTCTC GTCGGTCTCG CCGGACGGGC TCTGCCCCGC GCTGAAGCAG GCCATGGCCC GCGACGTGCT GGTGATGACC TGGGACAGCG ACGTGAACCC CGACTGCCGC TCCTACTACA TCAACCAGGG CACGCCCGAG CAGCTCGGCG GCCTTTTGGT CGACATGGCC AATGACGGGC TCGAGGGCAA GGAAAAGGCC AAGGTGGCCT TCTTCTATTC CTCGCCGACC GTCACCGACC AGAACGCCTG GGCCGAGGCC GCCAAGGCCA GGATCGCGGC CGACCATCCG GGCTGGGAGA TCGTGACCAC CCAGTATGGC TACAACGACG CGCAGAAGTC GCTGCAGACG GCCGAGAGCA TCCTGAGCGC CTATCCCGAT CTCGATGCGA TCATCGCGCC CGACGCGAAC GCGCTGCCGG CCTCGGCGCA GGCGGCCGAG AACCTCGGCC GGGCGGGCGA GGTGACGATC GTGGGCTTCT CGACGCCGAA CGTGATGCGC CCCTATGTCA AGCGCGGCAC CGTCGAGCGG TTCGGCCTCT GGGACGTGAC GCAGCAGGGG GCCATCTCGG TCGCTGTGGC CGCGCATGTG CTGAAGGACG GCCCGCTCAA TGTGGGCGAT AGCCTCGAAG TGCCGGGCAT CGGCTCGGTC GAGGTTTCGC CCAACTCGGT GCAGGGCTAC GACTACGAGG CCGAGGGCAA CGGCATCATC CTGCTGCCCG AGCGCACTGT CTTCACCGCC GAGAACATCG ACAATTTCGA CTTCTGA
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Protein sequence | MRKTVRLLGT VAAGLMAANV AAAQEIAFIP KLVGVGFFTS GGNGAMKMGE ELGVKVTYDG PTEPSVSGQV QFVNNFVNQG YGAIVLSSVS PDGLCPALKQ AMARDVLVMT WDSDVNPDCR SYYINQGTPE QLGGLLVDMA NDGLEGKEKA KVAFFYSSPT VTDQNAWAEA AKARIAADHP GWEIVTTQYG YNDAQKSLQT AESILSAYPD LDAIIAPDAN ALPASAQAAE NLGRAGEVTI VGFSTPNVMR PYVKRGTVER FGLWDVTQQG AISVAVAAHV LKDGPLNVGD SLEVPGIGSV EVSPNSVQGY DYEAEGNGII LLPERTVFTA ENIDNFDF
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