Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3488 |
Symbol | |
ID | 3721904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | + |
Start bp | 561562 |
End bp | 562053 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640073154 |
Product | hypothetical protein |
Protein accession | YP_354992 |
Protein GI | 77465489 |
COG category | [S] Function unknown |
COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0408329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCTG AGCGCGCCAT GGCCGGGTTC TTCGGCAAGC TGCCGTCCAC CGGCGATTTC GTGACGCGCG GCCTCTCGCC CGCCTTCCGC GCGGCCTGGG ACGGCTGGAT CACGCGCCAT GTCGCGGGCC GGCTCGGCGC GGGTCCCGAG GGCGGGCTGC GGGTGCGGCT CCGCTCCGGC GGGCGGGTCG CGGGGGGCGT GGTGCTGCCC GGCCGCGACC GGATCGGCCG GAGCTTCCCG CTCTCGCTCC TTCTGGTGGC GGACGGGCTG CCCGGACCGG ACGGCCTCGA TCCGTGGTGC GAGGCGGCCC GGGCGGCGGC CGCCGTCCAC CCGGAGCCGG ACGCGCTCTG GCAGGCGCTG AGCGATATTC CTGTCCCGGA AGGCGACGCC GCAGCGGCCG CGCCGCTCCT TCTCTGGACG GGTAAGGCCA GCGCCGCCTG CGATCCCCGC GACCCGGCGG AGGCCCTCGG GAGGCTCCTC GGAACCGGCT GA
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Protein sequence | MASERAMAGF FGKLPSTGDF VTRGLSPAFR AAWDGWITRH VAGRLGAGPE GGLRVRLRSG GRVAGGVVLP GRDRIGRSFP LSLLLVADGL PGPDGLDPWC EAARAAAAVH PEPDALWQAL SDIPVPEGDA AAAAPLLLWT GKASAACDPR DPAEALGRLL GTG
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