Gene RSP_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3488 
Symbol 
ID3721904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007494 
Strand
Start bp561562 
End bp562053 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content77% 
IMG OID640073154 
Producthypothetical protein 
Protein accessionYP_354992 
Protein GI77465489 
COG category[S] Function unknown 
COG ID[COG3913] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03373] type VI secretion-associated protein, BMA_A0400 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0408329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCTG AGCGCGCCAT GGCCGGGTTC TTCGGCAAGC TGCCGTCCAC CGGCGATTTC 
GTGACGCGCG GCCTCTCGCC CGCCTTCCGC GCGGCCTGGG ACGGCTGGAT CACGCGCCAT
GTCGCGGGCC GGCTCGGCGC GGGTCCCGAG GGCGGGCTGC GGGTGCGGCT CCGCTCCGGC
GGGCGGGTCG CGGGGGGCGT GGTGCTGCCC GGCCGCGACC GGATCGGCCG GAGCTTCCCG
CTCTCGCTCC TTCTGGTGGC GGACGGGCTG CCCGGACCGG ACGGCCTCGA TCCGTGGTGC
GAGGCGGCCC GGGCGGCGGC CGCCGTCCAC CCGGAGCCGG ACGCGCTCTG GCAGGCGCTG
AGCGATATTC CTGTCCCGGA AGGCGACGCC GCAGCGGCCG CGCCGCTCCT TCTCTGGACG
GGTAAGGCCA GCGCCGCCTG CGATCCCCGC GACCCGGCGG AGGCCCTCGG GAGGCTCCTC
GGAACCGGCT GA
 
Protein sequence
MASERAMAGF FGKLPSTGDF VTRGLSPAFR AAWDGWITRH VAGRLGAGPE GGLRVRLRSG 
GRVAGGVVLP GRDRIGRSFP LSLLLVADGL PGPDGLDPWC EAARAAAAVH PEPDALWQAL
SDIPVPEGDA AAAAPLLLWT GKASAACDPR DPAEALGRLL GTG