Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3479 |
Symbol | |
ID | 3721895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | + |
Start bp | 549562 |
End bp | 550053 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640073145 |
Product | hypothetical protein |
Protein accession | YP_354983 |
Protein GI | 77465480 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0327685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTCA CAGGCTACCT CAAGATCGAC GACATCAAGG GCGAGTCGCG GCGCGCCGAC CACGAGGACG AGATCGACGC CTTCGGCGTG AGCTGGCTCG TCGAGCAGAC GAGCTCGGCC TCGACCGGCA GCGGCCGGAC GCGCGGCCGC GCCAGGGTGG GCGACTTCCG GCTGCGCAAA TGGATGGACG CCTCTTCACC CTATCTCGCG CTGGCCTGCA TGCAGGGCAA GTCCTTCCCC GAGATGATCT TCATGGCCCG CAAGGACTCC GGCGAGGCGC ATCTCGATTA TCTGCAGGTG ACGCTGAAGA ACTGCATCGT CTCGAGCTAT GCGCTCGCGC AGGATGCGCC CGAGGAGTCG GGCCATGACA TGATCGCCGA GGATGTGGCG ATCTCGTTCG AGACCATCAC CTACAAATAT GTCGTTCAGG CCGACGACCA TTCGGCCGGC GACGAGCACG AGGTCGAATA TAACGTCGTC GCCGCCCGCT GA
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Protein sequence | MAFTGYLKID DIKGESRRAD HEDEIDAFGV SWLVEQTSSA STGSGRTRGR ARVGDFRLRK WMDASSPYLA LACMQGKSFP EMIFMARKDS GEAHLDYLQV TLKNCIVSSY ALAQDAPEES GHDMIAEDVA ISFETITYKY VVQADDHSAG DEHEVEYNVV AAR
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