| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3453 |
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| Symbol | |
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| ID | 3721739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 522987 |
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| End bp | 523970 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640073120 |
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| Product | TRAP-T family transporter periplasmic binding protein |
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| Protein accession | YP_354958 |
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| Protein GI | 77465455 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.645275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGG GAAGTATCGC TGCCACTGCC GCTTTTGCCG TCTCGGTCGC CGCCACGTCG
GCCTGGGCCG AAACCAAATG GGACATGTCG ATCGTCTGGC CGGAAGGCAA CTTCCACACC
CAGAACGCCA TGGCGTTCGC GGATGCGGTG AAGGAAGCGA CTGACGGCGA AGTGGTCATC
ACGGTCCATT CCGGCGGCGC GCTCGGGATC AAGGGCCCGG AAGGTATGGC CGCGGTGCGC
GACGGGCTGG TGCCGATCGC AGAGATCCTG CTCAACCAGC AGGTGGGCGA GGCTCCGGTA
CTCGGGATCG AGACGCTGCC CTTCCTCGCG CCGACGATGG CCGACCTCGC GCTCCTGCAC
AAGTTCTACC GTCCGAAGCT CGACGAGGTC GCGGCCGGCA TGAACCAGAA GATCCTCTAC
ATGGTGCCGT GGCCGGGGCA GGCCGTCTTC GCGCCGAACC CGATCAACAC GGTCGAGGAC
CTCAAGGGCC TCACGATCCG CGTGGTCGAT TCGAACGGCA ACGACTTCTT CGGCGCGCTC
GGCGCCACGC CGATCCAGAT GCCCTGGGGC GAGGTGGTGC CCTCGCTCGC GGCTGGCACC
ATCAAGGGCG TGACGACCTC CTCCTCGTCG GGCGTGGACG GCGCCTTCTG GGAATTCACC
AAATACATGA GCACCTTCAA TTGGCAGGCT TCGTCGAACA TCATGTCGGT GAACCTCGAT
GCCTGGAACG AGCTGCCGCT CGAGACCCGG CAGAAGATCG AGGAAACCGC CGCCGGCCTC
GAAGGTCAGT TCTGGCTGAA CAGCCGCGCC GAGGATGCCA AGAAGATCGC CACCCTGAAG
GAGAACGGTG TCGAGGTCTC GGCTCCGTCG CCCGAACTGT CGGCCGCGCT GCTCGAGAAG
GCGCTGCCGC TCTGGGATGC CTACAAGACC CGGGTGCCGG AGGCGGCGCC GATCATCGAC
GCCTATCTGA CCCTGCGCAA CTGA
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| Protein sequence | MKQGSIAATA AFAVSVAATS AWAETKWDMS IVWPEGNFHT QNAMAFADAV KEATDGEVVI
TVHSGGALGI KGPEGMAAVR DGLVPIAEIL LNQQVGEAPV LGIETLPFLA PTMADLALLH
KFYRPKLDEV AAGMNQKILY MVPWPGQAVF APNPINTVED LKGLTIRVVD SNGNDFFGAL
GATPIQMPWG EVVPSLAAGT IKGVTTSSSS GVDGAFWEFT KYMSTFNWQA SSNIMSVNLD
AWNELPLETR QKIEETAAGL EGQFWLNSRA EDAKKIATLK ENGVEVSAPS PELSAALLEK
ALPLWDAYKT RVPEAAPIID AYLTLRN
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