| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3451 |
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| Symbol | |
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| ID | 3721737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 521046 |
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| End bp | 522347 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640073118 |
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| Product | TRAP-T family transporter large inner membrane subunit |
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| Protein accession | YP_354956 |
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| Protein GI | 77465453 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0331504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAGA TCATTGCCAC CCTGCTCGGC CTTCTCACGC TGCTTCTGGG CAGCGGCCTC
TGGATCGGCC TCGGGCTCAT CGGCACCGGC GTGGGGCTGC TTACGCTCTT CCGGCCGAAC
ATGCCGGGGC TCAAGCTTCT CGCGCAGCAG ACCTACAACG TCGTCGTCTC GCCCGAGCTG
CTCGCGCTGC CGCTCTTCAT CCTGATGGCC GAGATCCTCT TCCGCACGAA GATCTCCGAG
GCGCTGTTCA CCGGCCTCTC GCCCTGGCTG CGCCGGGTGC CGGGGCGGCT GTCGCACCTG
ACCGTGCTCG GCTGCACCAT GTTCGCCTCG GTCTGCGGCT CGTCGGCGGC GACCACGGCC
ACCGTGGGGC GCATCACCGC CAAGGAACTG ATCGACCGCG GCTACAACCG CGACCTCGTG
ACGGGCAGCC TTGCCGGGGC GGGGACGCTC GGCTTCCTGA TCCCGCCCTC GACCATCATG
ATCATCTACG GGGTGATGGC CGAGGAATCG ATCCTGCGGC TCTTCATCGC CGGCATCGTG
CCGGGGCTGA TGCTCGCGGC CTCCTACATG GGGTATCTCG CGATCCGCTC GTGGCTCAAC
CCCGCGCTCG TGGGCGCGAC TCCCCCGCGC ACCAGCTTCC GCGAGAAGAT GGTGGCGTTG
AAGGATCTGG GGCCGCTTCT TCTCCTCATC GCGGGCGTCA TCGGCTCGAT GTACGGCGGG
ATCGCCTCGC CGACCGAGGC CGCCACCGTG GGCGTGGTCG TCTCGATGAT CATCGGCTTC
GCGCAGCGCA CGCTGACGCT GGGGGGCCTT CTGAGCGCCG CGCGTCAGGC GGCCGAAAGC
TGCGCCATGA TCGGCCTCAT CATGATCGGG GCGATGTTCC TGTCGACGAT GATCGGCTAT
CTCGGCGTGC CGCGCTACAT CGCGACCGAG ATCCAGAGCT GGGGCATGTC GCCCCTGATG
CTCGTGGTGG TGCTGCTGAT CTTCTACGTC CTGCTCGGCA CGGTGATGGA GGGGCTCGGC
ATCATCGTGA TGACGCTGCC GATCACGCTG CCGCTGGCGG TGGCCGCGGG CTACGACAAG
GTCTGGTTCG GCATCTTCCT CGTGATCGTG GTCGAGATGG CCCAGATCAC GCCGCCGGTG
GGCTTCAACC TCACGGTGAT CCAGCGGCTG ACGGGGGACA GCATGGGGCG CATCACGCGC
GCCACCATGC CCTTCTTCCT CATCATGGCG GCCTTCGTGC TGCTCATCGC GGTCTTCCCG
GGCATCATCG GCTTCCTGCC GGACCTGATA CGCGGCAACT GA
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| Protein sequence | MGKIIATLLG LLTLLLGSGL WIGLGLIGTG VGLLTLFRPN MPGLKLLAQQ TYNVVVSPEL
LALPLFILMA EILFRTKISE ALFTGLSPWL RRVPGRLSHL TVLGCTMFAS VCGSSAATTA
TVGRITAKEL IDRGYNRDLV TGSLAGAGTL GFLIPPSTIM IIYGVMAEES ILRLFIAGIV
PGLMLAASYM GYLAIRSWLN PALVGATPPR TSFREKMVAL KDLGPLLLLI AGVIGSMYGG
IASPTEAATV GVVVSMIIGF AQRTLTLGGL LSAARQAAES CAMIGLIMIG AMFLSTMIGY
LGVPRYIATE IQSWGMSPLM LVVVLLIFYV LLGTVMEGLG IIVMTLPITL PLAVAAGYDK
VWFGIFLVIV VEMAQITPPV GFNLTVIQRL TGDSMGRITR ATMPFFLIMA AFVLLIAVFP
GIIGFLPDLI RGN
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