| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3442 |
|---|
| Symbol | |
|---|
| ID | 3721728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | + |
|---|
| Start bp | 512299 |
|---|
| End bp | 513240 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640073109 |
|---|
| Product | 2-hydroxyacid dehydrogenase |
|---|
| Protein accession | YP_354947 |
|---|
| Protein GI | 77465444 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0956565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGGA TCGCGCTTGT CACCCGTCTG TCGCCCGAGG CCGAGGCCCA TTGGGCGGGC
CATCTCGCCC GCGCCCTGCC CGGCGAGCGG ATCGACGGCT TCCGCGAGCT GAGCCCCGCC
GAGCGGGCCG AGGTGGACAT CGCCATCGTG GCCAATCCCG ACCCGGCCGA TCTGGCCGAG
CTTCCGAACC TCGTCTGGAT CCACAGCCTC TGGGCCGGGG TCGAGCGGCT GGTGGCCGAA
CTGGGCCATC TCGCGCGCCC CATCGTGCGG CTCGTCGACC CCGAGCTCGC CCGCACCATG
GCCGAGGCGG CTTTGGCCTG GACCTATTAT CTCTTCCGCG ACATGCCGGC CTATGCCGCC
CAGCAGCGCG CCCGCGTCTG GAAGGGGCTG CCCTACAAAC GCCCCGAGCG CACGACAGTG
GGCGTGCTGG GCTTGGGCGA ACTCGGGGCG GCGGCGGCCC TCCGGCTCCG CGACGCGGGC
TTCGACGTCC ATGGCTGGAG CCGGTCGCCC AAGGAGATCG CGGGTGTGAC CTGCCATGCC
GGCGAAGAAA CGCTCGAGCG GATGCTGGGG CAGGTCGAGA TCCTCGTCTG CCTCCTGCCG
CTCACGGGCG AAACGCGGGG GCTTCTCGAT GCGCGCCGGC TGGCGTGCCT GCCCGAGGGA
GCGCAGATCG TCAACTTCGC CCGCGGCCCG ATCCTCGACA GCGCGGCGCT GATCGAAGCA
CTCGACAGCG GCCGGATCGG CCATGCGGTG CTCGACGTGT TCGAGGTCGA GCCCCTGCCC
GAGGCCTCGC CCTTCTGGGG CCATCCGAAG GTGACCGTGC TGCCGCATAT CTCAGCCGCC
ACCGACCCCG AGACCGCCTC GGCCATCGTG GGCGCGCATG TGGCCGACTA CCGCGCGACC
GGCCGTATCC CGCCCTCGGT CGATCTCACC CGCGGCTACT GA
|
|---|
| Protein sequence | MSRIALVTRL SPEAEAHWAG HLARALPGER IDGFRELSPA ERAEVDIAIV ANPDPADLAE
LPNLVWIHSL WAGVERLVAE LGHLARPIVR LVDPELARTM AEAALAWTYY LFRDMPAYAA
QQRARVWKGL PYKRPERTTV GVLGLGELGA AAALRLRDAG FDVHGWSRSP KEIAGVTCHA
GEETLERMLG QVEILVCLLP LTGETRGLLD ARRLACLPEG AQIVNFARGP ILDSAALIEA
LDSGRIGHAV LDVFEVEPLP EASPFWGHPK VTVLPHISAA TDPETASAIV GAHVADYRAT
GRIPPSVDLT RGY
|
|---|
| |