| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3439 |
|---|
| Symbol | |
|---|
| ID | 3721725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | + |
|---|
| Start bp | 509406 |
|---|
| End bp | 510614 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640073106 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_354944 |
|---|
| Protein GI | 77465441 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCT CCCGCCTCTC CTCCCGCCTT CAGGCCGTGC AGCCCTCGCC CACCATCGCC
ATGACGCGCC TTGCAGCCCA GCTCCGCCGC GAGGGCAAGG ACATCATCGG CCTGTCGCAG
GGCGAGCCCG ATTTCGACAC GCCCGTCCAT ATCCGGCAGG CCGCGGCCGC CGCCATCGAG
GCAGGCCAGA CCCGCTACAC CGACGTGGAC GGCACGCCCG AGCTGAAGGC CGCCATCGTC
GAGAAATTCC GCCGCGAGAA CGGGCTCTCC TACGAGACGA ACCAGATCAG CGTCGGCACC
GGCGGCAAGC AGGTGCTCTA CAACGCGCTG CTGGCCACGC TCGACGAGGG CGACGAGGTG
ATCGTGCCCG CGCCCTACTG GGTCTCCTAC CCCGACATGG TGCGGCTCGC GGGCGGGGTG
CCGGTCACCG TTTCCTGCCC CGAGGAGGAC GATTTCCTGC TGACCGCGCC CGCGCTGCGG
GCCGCGATCA CGCCGCGCAC CAAATGGGTG ATCCTGAACT CACCCTCGAA CCCGACCGGC
ATGGGCTATT CGGCCGCCCA TCTGCGCGCG CTGGCCGACG TGCTGCTCGA GTTCCCGCAT
GTGCTGGTGA TGACCGACGA CATGTACGAG CATCTGCGCT ACGACGGCTG GGAATTCGCC
ACCATCGCGC AGGTCGAGCC GAAGCTCATG GACCGGGTGC TGACCTGCAA CGGCGTGTCG
AAGGCCTTCT CGATGACCGG CTGGCGCATC GGCTATGCCG GGGGTCCGGC CGACATCATC
AAGGCGATGG CCACGCTCCA GTCGCAATCG ACCTCGAACC CCTCCTCGGT GAGCCAGGCC
GCGGCGCTCG CGGCCCTGAC GGGGCCGATG GAGTTCCTGG CCGAGCGCAA CGAGATCTTC
CGCCAGCGGC GCGACCTGTG CCTCTCGGCG CTGAACCAGA TCGAGGGGCT GAGCTGCGTG
CGCCCGAACG GCGCCTTCTA CCTCTTCCCC TCCTGCGCGG GCATGATCGG CCGCACCCGT
CCCGACGGGC GCAAGATCGA GACCGACACG GATTTCGTGA TGTATCTCGT CGAGGAGGCG
GGCGTGGCCG CGGTGCCGGG CAGCGCCTTC GGCCTCGCGC CCTACTTCCG CATCTCCTTT
GCCACCGACA CCGAGCGGCT GCGCACCGCC TGCGAGCGGA TCCGCGCGGC CTCGGCCCGG
CTGACCTGA
|
|---|
| Protein sequence | MTSSRLSSRL QAVQPSPTIA MTRLAAQLRR EGKDIIGLSQ GEPDFDTPVH IRQAAAAAIE
AGQTRYTDVD GTPELKAAIV EKFRRENGLS YETNQISVGT GGKQVLYNAL LATLDEGDEV
IVPAPYWVSY PDMVRLAGGV PVTVSCPEED DFLLTAPALR AAITPRTKWV ILNSPSNPTG
MGYSAAHLRA LADVLLEFPH VLVMTDDMYE HLRYDGWEFA TIAQVEPKLM DRVLTCNGVS
KAFSMTGWRI GYAGGPADII KAMATLQSQS TSNPSSVSQA AALAALTGPM EFLAERNEIF
RQRRDLCLSA LNQIEGLSCV RPNGAFYLFP SCAGMIGRTR PDGRKIETDT DFVMYLVEEA
GVAAVPGSAF GLAPYFRISF ATDTERLRTA CERIRAASAR LT
|
|---|
| |