Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3405 |
Symbol | gntR |
ID | 3721690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | + |
Start bp | 471417 |
End bp | 472136 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640073072 |
Product | GntR family transcriptional regulator |
Protein accession | YP_354910 |
Protein GI | 77465407 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCATC TCAAACAGTC GACCCGAATG CCGCTGGCCG ACAAGGTCTA TCACACGCTC TACACCCGCA TCTCGAACGG GGACTATCCA CCGAACCAGA AACTGCCGCC CGAGATGCAG CTGGCCGAGG AGCTGGGCGT CTCGCGCCCG GTGCTGCGGG CGGCGCTGGA ACGGCTGCGC GACGAGGGGA TCGTCCATTC CCGGCAGGGC GCGGGCAACT ACGTCCGCCC GATCCAGATC GCGCCGCTGG GCTTTGCGCG GGTCGAGACC TTGGCCGACA TCCAGCGCTG CTACGAGTTC CGCATCACCA TCGAGACCGA CGCCACATGG CTCGCAGCGC AGCGCCGCAA CCCGGCCATC CTCGCCGAGA TCGAGGCCGC GCTCGAACAG CTGCGGGCGG CGACCGGGTC GATGCAGCAC CGCGAGGATG CCGATTTCGC CTTCCATGTG GGCATCGCAC GAGGGGCGAA CAACCAGTAT TACGAGGCCA CGCTGCGCGC GCTGCGCAAC CACATCAATG TGGGGATGAA GCTGCACGGC GACGCGCTGA TGACCGACGG CCAGAAGGGT CTCGAAGGGG TGCTGCGCGA ACATGCGGGC ATCTTCGAGG CCGTGCGGGA CGGCCGGGCC GACGAGGCGC GCGACCAGAT GCGCGCCCAT CTCGAACATT CCCGCGACCG CCTGTTCGGC GGGAGCCTCC TCGATCTCCG GATGCGCTGA
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Protein sequence | MAHLKQSTRM PLADKVYHTL YTRISNGDYP PNQKLPPEMQ LAEELGVSRP VLRAALERLR DEGIVHSRQG AGNYVRPIQI APLGFARVET LADIQRCYEF RITIETDATW LAAQRRNPAI LAEIEAALEQ LRAATGSMQH REDADFAFHV GIARGANNQY YEATLRALRN HINVGMKLHG DALMTDGQKG LEGVLREHAG IFEAVRDGRA DEARDQMRAH LEHSRDRLFG GSLLDLRMR
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