| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3402 |
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| Symbol | |
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| ID | 3721687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | + |
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| Start bp | 466542 |
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| End bp | 469187 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640073069 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_354907 |
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| Protein GI | 77465404 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.144033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTCCGA TGATCCCGCA TCCGCCCGCA GTCCTCGCCC ATCGCCTGTC GGAAGGCCAG
CGCCTCGCCA CGCCGCTGAT GCGGGCGCTG ATGCGGGCGA CCGGCACCCA GGTGGACGCG
GCCATCGCCC GCACCATCGC GGAACTCGGC GCGCACTGTG GCGCCGACCG GACGCGGGTC
TACCGGATCG AGGCCGGGCA GGTGCTGGAC TGCACGCACG AATGGTGCAG GTCGGGGATC
TCGGAGATCC GGCCGGAGAT GCAGCGCATT CCGCTCGGCA CGCTCGATCG CTGGATGCCG
ATCCTGCGCC GCGGCGAACC GGTCGATGTG CCCGATCTGC ACGGCCTGCC CGAGGACGAT
CCGGCGAAGC AGCAGATGGC CCGGCACGGG ATCCGGGCGC TTGTCCTGAT GCCCCTGACC
GCTGGCACGG CGCTGACCGG CGTGGTGGGC CTCAGCCTCT TCAGGGCCCG TCGCCCCGTC
GATCCGGCAG AGATGGCCCT CCTGCACTCC ATCGCCGAGG CGATGGGTGC CGCCCTCGCA
CGGCGGGATG CCGAGCGCCG CGCCGTGGCG GCCCGCAGTG CCGCCCGCGA TGTGGCGCGC
AACCTCGAAC GGCTGGCGCG CGTGACCGAG CTGATGACGA ACCTCGTCAT CGTGACCGAC
GTCGAGCAGC AGATCGTCTG GGTGAACCGG GCCTTCGAAC GCCAGACGGG TCACAGCCTC
GAGGCGATCC GGGGCCGGAA CTTTGCCGAG GTGGTGCGCG GCCCCGGAAC GGATCCCGGC
GTCTGCGCCG CCGTCGCCGA GGCGATCCGC ACCTGTTCGA GCTGCGAGGG CGAGACGATC
AACTACACGG CCGCGGGCCA GCCCTACTGG ATCCGCTTCA ACGCCCATCC GCTGTCCGAC
GCGGACGGGC GCTACGCCGG TCATGCGTCG GTCGAGACGG TCATCACCGA CCGCAAGGTG
CTCGAGCGCG AGCTGGCCAC CCGCAACGCC TTTCTGACCG CCGTTCTTCA GACCAGCGTC
TCGGCCATCG TGGCCCTGAA TGCAGAGGGC GGCATCGTCT ATGCCAACGA CGAGGCCCGG
CGGCTCCTCG TGCTGCAGCC CCATCGCGGC GGTCTCCGGA TGGAGGCGGT CCTAGAGACG
CTGGACGGCC GTCCGCTGCC CGAGGCCGAC ATGCCCTCGG CCCTCGTGCG CGCCACCGGC
GCGCCGCTGC ACGACCTGCG CTATGCGATC CGCCGCCCCG ATGGCCAGTT CGGCATCCTG
TCCATCAATG CAGCCCCCCT GCCACAGGCC GCCGACGACG CGCGGATCGT GATCTCCGTC
ACCGACATCA CCCATGCCGA GGCCTCGGCC GAGCGGCTGC GGCGGCAGGC GGCGGAGGAC
CCGCTGACCG GGCTCGCGAA CCGGCGCGCG CTCGCCGATG CCGTCGAGAC CCGGCTGACG
GAGGCCGCTC CCTTCGCGCT GGTGATGCTC GACCTCGACA ATTTCAAGGC GGTGAACGAC
CTGCAGCGCC ACGACACCGG GGATGCGGTG CTGCGCATCG CGGCCGACCG GCTGCGGGCC
GTGGCGGGGG CCGACTGTCT CGTGGCGCGG ATGGGCGGCG ACGAATTCAT GGTGCTGGCG
CCCGGCACCG ACGCCGCCAG TGCCCCGCGT CTGGCCGAGG CGCTGCGGGC CGCCATCTCG
GCCCCGATCG AGGTCGGCCG CCAGCCGGTG CATCTGGCAG CCTCCGCCGG CATCGCGCTC
CATCCCGAAC ACGGGACCTC GATGGCGCTT CTGATGACAG GCGCGGACAT CGCGCTGCAT
GCCGCCAAAC GCGCGGGGCG CAACCGCAGC GTCCTGCTCT CGCAGGCGCA ATTCGCCGCC
GAAGCCCGGC GCAGCGCCAT CACCCAGGCG CTGGCGGCCG ACGTCGAGGC CGACCTGCGC
CTCGTGTTTC AACCGCAGTT CAGGGCCTGC GGCGCCTTCG ACGGGGCCGA GGCGCTCCTG
CGCTGGACTG ATCCCCGGCT GGGCGAGATC GGCCCCGCGG AGTTCATTCC CATCGCCGAG
GAAGCGGGCC TCATCCAGCG CATCGACGCG CATGTGGCGG TTCTGGCCGC GCGGCAGCTC
GGCCTCTGGG CGCGGCGTGG CTGGCGCCAC CGGCTCGCGG TCAATGCCTC GGCCCAGACC
TTCGCCCGCG CGGGCTTTGC CGAGGAGCTG CTGCAGCACC TCGCGGAGGA GGATGTCTGC
CCGCAGCAGC TCGTGGTCGA ACTGACCGAC ACGTCCCTCG CCACGCTCTC CTCGGTCGCG
GACCACAATA TCGCCACCCT GCGGCGCGCC GGTGTGGGCA TCGCCATCGA CGATTTCGGC
ACGGGCTACG CCTCGCTCTC CTATCTGCAT CGGATCGAGG CGACCGAGAT CAAGATCGAC
CGCGGCTTCG TGGCGGGCCT CGAGACGGCG GAGCGGCGCG ACAGCAAGCC GCTGATCCAG
GCGATCCTCA GCCTTGCCCA TGCCCTGGGC CTTGCCGTGA CCGCCGAAGG CGTCGAGACC
GAGCGGCAGC GCAGCTGGCT CTCGGCGGAG GGCTGCGACC GGCTGCAGGG CTATCTGCTG
GGTCGCCCCC TGCCCGTCGA GGCCTTCGAG GCGGCCTTCG TGACGCCAGC CGCGGTTCCG
GGCTGA
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| Protein sequence | MAPMIPHPPA VLAHRLSEGQ RLATPLMRAL MRATGTQVDA AIARTIAELG AHCGADRTRV
YRIEAGQVLD CTHEWCRSGI SEIRPEMQRI PLGTLDRWMP ILRRGEPVDV PDLHGLPEDD
PAKQQMARHG IRALVLMPLT AGTALTGVVG LSLFRARRPV DPAEMALLHS IAEAMGAALA
RRDAERRAVA ARSAARDVAR NLERLARVTE LMTNLVIVTD VEQQIVWVNR AFERQTGHSL
EAIRGRNFAE VVRGPGTDPG VCAAVAEAIR TCSSCEGETI NYTAAGQPYW IRFNAHPLSD
ADGRYAGHAS VETVITDRKV LERELATRNA FLTAVLQTSV SAIVALNAEG GIVYANDEAR
RLLVLQPHRG GLRMEAVLET LDGRPLPEAD MPSALVRATG APLHDLRYAI RRPDGQFGIL
SINAAPLPQA ADDARIVISV TDITHAEASA ERLRRQAAED PLTGLANRRA LADAVETRLT
EAAPFALVML DLDNFKAVND LQRHDTGDAV LRIAADRLRA VAGADCLVAR MGGDEFMVLA
PGTDAASAPR LAEALRAAIS APIEVGRQPV HLAASAGIAL HPEHGTSMAL LMTGADIALH
AAKRAGRNRS VLLSQAQFAA EARRSAITQA LAADVEADLR LVFQPQFRAC GAFDGAEALL
RWTDPRLGEI GPAEFIPIAE EAGLIQRIDA HVAVLAARQL GLWARRGWRH RLAVNASAQT
FARAGFAEEL LQHLAEEDVC PQQLVVELTD TSLATLSSVA DHNIATLRRA GVGIAIDDFG
TGYASLSYLH RIEATEIKID RGFVAGLETA ERRDSKPLIQ AILSLAHALG LAVTAEGVET
ERQRSWLSAE GCDRLQGYLL GRPLPVEAFE AAFVTPAAVP G
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