| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3388 |
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| Symbol | |
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| ID | 3721673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | + |
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| Start bp | 452647 |
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| End bp | 453729 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640073055 |
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| Product | putative isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase ttuC |
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| Protein accession | YP_354893 |
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| Protein GI | 77465390 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATAC GCACCCACAG GATCGCCGCC ATTCCCGGCG ACGGGATCGG GATCGAGGTG
GTCGCGGCGG GGCTCGAGGT GCTCGAGGCG CTGGCCGACC GCGACGGCGG CTTCCGCTTC
GACGTGGAGA GCTTCGACTG GGGAACCGAC CGCTACCGGC GCACCGGCGC CTTCATGCCC
GAGGACGGGG CCGACCGGCT GCGCGGCTTC GACGCGATCC TGTTCGGCGC GGTGGGCGCG
CCCGACGTGG CCGACCATCT GACGCTCTGG GGGCTGCGCC TCGCCATCTG CCAGCCGCTC
GACCAATATG CCAATGTGCG GCCGACCCGG ATGCTGCCCG GCATCCGCAG CCCGCTCCGC
CATGTCGGGG AGAGCGAGCT CGACTGGGTG ATCGTGCGCG AGAATTCCGA GGGCGAATAT
GCCGGGCAAG GCGGGCGCTC GCACCCCGGC CTGCCGCTGG AGGTGGCCAC GGATGTGTCG
ATCTTCACCC GCGCCGGGGT CGAGCGAATC ATGCGCTTCG CCTTCCGCCT TGCGCAGTCG
CGGCCGCGCA AGCTCCTGAC CGTGGTGACC AAATCCAACG CGCAGCGGCA CGGCATGGTG
CTCTGGGACC AGATCGCGGG CGAGGTCGCG CGCGAGTTCC CGGACGTGCG CTGGGACAAG
ATGCTGGTCG ATGCCATGAC GGTGCGCATG GTGCAGAAGC CCGCATCGCT CGACACGATC
GTCGCCACGA ACCTTCATGC GGACATCCTG TCGGATCTCG CCGCGGCACT GGCGGGCTCC
ATCGGCGTGG CGCCCACCGC CAACCTCAAC CCCGAGCGCG ACACGCCCTC GATGTTCGAG
CCGATCCACG GCTCGGCCTT CGACATCACC GGGCGGGGCA TCGCGAACCC GGTGGCCACC
TTCTGGACCG CCGCCATGAT GCTCGAGCAT CTGGGGGAGG CCGAGGCCGC GGGGCGGCTG
ATGACCGCCG TGGGCCGGGT GACGGCGGAC GAGGATCTCC ATACGCCCGA CCTCGGCGGT
CGGGCCACCA CGCGGCAGGT GACGGATGCC CTGATCGCGG CCCTGCGCGG CCGCAACGCC
TGA
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| Protein sequence | MDIRTHRIAA IPGDGIGIEV VAAGLEVLEA LADRDGGFRF DVESFDWGTD RYRRTGAFMP
EDGADRLRGF DAILFGAVGA PDVADHLTLW GLRLAICQPL DQYANVRPTR MLPGIRSPLR
HVGESELDWV IVRENSEGEY AGQGGRSHPG LPLEVATDVS IFTRAGVERI MRFAFRLAQS
RPRKLLTVVT KSNAQRHGMV LWDQIAGEVA REFPDVRWDK MLVDAMTVRM VQKPASLDTI
VATNLHADIL SDLAAALAGS IGVAPTANLN PERDTPSMFE PIHGSAFDIT GRGIANPVAT
FWTAAMMLEH LGEAEAAGRL MTAVGRVTAD EDLHTPDLGG RATTRQVTDA LIAALRGRNA
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