| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3370 |
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| Symbol | |
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| ID | 3722072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 434217 |
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| End bp | 435638 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640073037 |
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| Product | TRAP dicarboxylate family transporter DctM subunit |
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| Protein accession | YP_354875 |
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| Protein GI | 77465372 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.34458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGACC CTCAAGTGGC CCTGCTGATG CTGGGCATCT TCATCTCGCT CGTCTTCCTC
GGCTTCCCCA TCGCCTTCAC CCTCATGGCC CTCGGCATCG GCTTCGGCTA TTACGCCTAT
TTCGATGCGA GCCGGATGTG GCGGGCCTTC AACCGGCTGG GGGAGGAGGC CGACGGCTGG
ACCTCGGCCT CGACCTGGGT CGAGGGGTTC TTCAACAACC GGATCTTCGA CCTCTTCATC
AACCAGACAT ACACGGTGAT GTCGAACGAG GTGCTGACCG CGATCCCGCT CTTTCTCTTC
ATGGGCTACA TCGTCGAGCG GGCGAACATC GTGGACCGGC TCTTTACCAC GCTCAACATC
GCCTCGAAGA ACATCCCCGG CTCGATGGGG GTGGCGGCGC TCGTGACCTG CGCGCTGTTC
GCCACGGCCA CCGGCATCGT GGGGGCGGTG GTCACGCTGA TGGGGCTTCT CGCGCTGCCC
GCGATGCTGA AATCCCGCTA CGACCATGCC TTCGCCTCGG GGATCATCTG CGCGGGCGGC
ACGCTCGGCA TCCTGATCCC GCCCTCGATC ATGCTGATCG TCTATGCGGC CTCCTCGGGC
GTCTCGATCG TGCGGCTCTA TGCGGCGGCG CTCCTGCCGG GGCTCACGCT CGTGGGCCTC
TATCTCGTCT ACATCATCGG CCGGGCGATC CTGCAGCCGC ATGTGGCGCC ACGCCCGGCG
CCGGGCGAGG TGCCGGACGT GCCGGGGGGC AAGCTCTTCC TGATGCTGCT CACCTCGTTC
TTCCCGCTGG CGGTGCTGAT CCTCGCGGTG CTGGGCTCGA TCCTCTTCGG GCTGGCCACG
CCCACCGAGG CGGCCTCGAT CGGGGCGCTC GGGGGCATGG TGCTGGCCGT TCTCTACCGC
GCGATGACCT TCGAGAGGCT GCGCGAGAGC GTCTATCTCA CCGTGCGCAC GACGGCGATG
GTCTGCTGGC TCTTCGTCGG CTCATACACC TTCTCGGCGG TCTTCTCCTA CCTCGGCGGC
GAGCAGGTGA TCGCCGACTT CGTGGGGAGC CTCGATCTCA CGCCGTTCCA GTTCCTCATC
CTTGCGCAGA TCATCATCTT CCTGCTCGGC TGGCCGCTCG AATGGTCCGA GATCATCATC
ATCTTCGTGC CGATCTTCCT GCCGCTCTTG CGGATCTTCG ACATCGACCC GCTGTTCTTC
GGGGTGCTCG TCGCGCTGAA CCTGCAGACC TCGTTCCTGA CACCGCCCAT GGCCATGTCG
GCCTATTACC TGAAGGGGAT CGCGCCGGCG CAGGTGCGGC TCACGCAGAT CTTCGCGGGC
TCCTTGCCCT ATGTGGGGAT GGTCTTCGTC TGCATGGCGC TGATGTATCT CTTCCCGCAG
ATCGTCTTCG CACTTCCGGA GTTCGTCTAT GGGGCGCGCT GA
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| Protein sequence | MTDPQVALLM LGIFISLVFL GFPIAFTLMA LGIGFGYYAY FDASRMWRAF NRLGEEADGW
TSASTWVEGF FNNRIFDLFI NQTYTVMSNE VLTAIPLFLF MGYIVERANI VDRLFTTLNI
ASKNIPGSMG VAALVTCALF ATATGIVGAV VTLMGLLALP AMLKSRYDHA FASGIICAGG
TLGILIPPSI MLIVYAASSG VSIVRLYAAA LLPGLTLVGL YLVYIIGRAI LQPHVAPRPA
PGEVPDVPGG KLFLMLLTSF FPLAVLILAV LGSILFGLAT PTEAASIGAL GGMVLAVLYR
AMTFERLRES VYLTVRTTAM VCWLFVGSYT FSAVFSYLGG EQVIADFVGS LDLTPFQFLI
LAQIIIFLLG WPLEWSEIII IFVPIFLPLL RIFDIDPLFF GVLVALNLQT SFLTPPMAMS
AYYLKGIAPA QVRLTQIFAG SLPYVGMVFV CMALMYLFPQ IVFALPEFVY GAR
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