Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3322 |
Symbol | acoR |
ID | 3722022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 383049 |
End bp | 384884 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640072987 |
Product | acetoin transcriptional regulator, sigma54 specific, AcoR |
Protein accession | YP_354826 |
Protein GI | 77465323 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGCACG AGCTCAGCCA TGTGCGCGAG ATCGAGGCTG CGGCCGAAGG GCGGCCGCCC GGGCGCGACC GGGTGGTGGT CGAAAGCTGG CTCCGCTGCC TGAACCAGCA TCGGCTCGAT CCGACCGCCC GGTCCGAGGC CTTCATCCTG CCCGAGACGG CGCTGCGCGA GCATCGCCAG CGGTCCGAGG CGCTGATCGC CATCGCCCGG TCGGGGATCG AGAGCCTCTA CGGGCTGGTC GCGGGGCAGA ATTACGTCCT GCTGCTTGCG GACCGGGCCG GGGTGACGGT GGAATATCTG GGCGACGAGG CCCAGAAGCA GGAACTGCGC CGGAGCGGTC TCTATATGGG CGCCGAATGG TCCGAGGCGC GCGCGGGCAC CTGCGCGCTC GGCGCCTGCA TCGAGACGGG CGAGCCGCTG GTGATCCACC AGAGCGATCA TTTCGACGCG ACGCACACCG GCCTCTCCTG CACCGCCGCG CCGATCTACG ACACGCTCGG CCGGCTCTCG GCGGTGCTCG ACATCTCGCT TCTCTCCTCG CCGCGCGCGA AGGCGAGCCA GTCGCTGGCG CTGAAGCTGG TGACGGCGGC GGCGCGGCGG ATCGAGATGG CGAACCTGAT GGCCGAGAAC CGACGCGAAT GGGTGCTCCG GCTCTCGGCC TCGCCGGATT TCCTCGATGT GGATCCCGAG GCGGCGCTGT CGCTCGACGG GACGGGGCGG GTGCTGGGGC TGACCCATGG CGCCGCACGG ATCCTCGCGC AGGCGGCGGG GCAGGACTGG CGCGCGGCGG GCGGGCTGAT CGGGCGGCCG GTCTCGGATT TCCTGAACGT GCGGGTGGAC CGGCTCGACG ATCTCATGCG CCAGCGCCCC GCAGCCGAGC GGTTCATCGA GACGCGCGAC GGCCACCGGC TCTTCGCCCA TGCGATCGAA CCGCGCCGCG CGCCTGCCCG GACGGTGCCC GCGCCGGTGA GCCTGCCGCC GCCGCTGCGA GGCCTTGCCG GCGACGATCC AACGATGGCC GCGCTCCTGC GGGCGGCCGC GGCCCTTGCG CCGCAGCGGC TGCCGATCCT GATCGAGGGC GAGACCGGCA CGGGCAAGCT CACGCTCGCC CGCGCGATCC ATGCGGCGGG GCGCGGCGGG CCCTTCACGG TGGTGCGCTG CGCCGAGATC GGCGAGGAGG AGGCGCTGCT CTTCGGCCGC CAGACCGGGC GGCGGCAGGA AGAGGGGCTG ATCGCTGCCG CCCATCGCGG CACGCTCGTC CTCGACAAGA TCGAGGATCT GCCGCCCCGC ACGCAGGCGC GCCTTCTGCG CCTGGTGGCC GAGGGCAGCT ACCTGCCGGT GGGCGGCCTG CGCCCGGTGC CGGTCGACGT GCGCATCCTT TCGACCGCGC TGCCGGGCGG GGCCGAGGGG CTGCGGCCCG ACCTCCTGCA CCGGCTGGGC GGGGCGTGGC TGCGGCTGCC GCCGCTGCGG GCGCGACAGG ACCGGCTGTG GCTGGCCGAG CGGCTGCTCG GCTCGGGCGA CCGGCCGCTC TCGCTTGCGC CCGAGGCGCT GGCGGTGCTG GCCTCGCATC TCTGGCCCGG CAATCTGCGC GAACTCGAGC ATATGGCGCA GACGCTGCGG GCCCTGGTGC CGGGCGCTGA GGTCGGCCTC GCCGATCTGC CGGAGACGAT CCGGGCGGGG ACCGCGTCCG GCCCAGGCGT CCCGCAGGCG GCAGGGGCGG TGCTGGCTCA GGTGCTGCGC CAGACCGGGG GCAATGTCTC CGAAGCCGCG CGACGGCTGG GCGTCAATCG CTCGACAATT CATCGCCAGA TCCGCCGAAT GGGCGTGACA CGCTGA
|
Protein sequence | MEHELSHVRE IEAAAEGRPP GRDRVVVESW LRCLNQHRLD PTARSEAFIL PETALREHRQ RSEALIAIAR SGIESLYGLV AGQNYVLLLA DRAGVTVEYL GDEAQKQELR RSGLYMGAEW SEARAGTCAL GACIETGEPL VIHQSDHFDA THTGLSCTAA PIYDTLGRLS AVLDISLLSS PRAKASQSLA LKLVTAAARR IEMANLMAEN RREWVLRLSA SPDFLDVDPE AALSLDGTGR VLGLTHGAAR ILAQAAGQDW RAAGGLIGRP VSDFLNVRVD RLDDLMRQRP AAERFIETRD GHRLFAHAIE PRRAPARTVP APVSLPPPLR GLAGDDPTMA ALLRAAAALA PQRLPILIEG ETGTGKLTLA RAIHAAGRGG PFTVVRCAEI GEEEALLFGR QTGRRQEEGL IAAAHRGTLV LDKIEDLPPR TQARLLRLVA EGSYLPVGGL RPVPVDVRIL STALPGGAEG LRPDLLHRLG GAWLRLPPLR ARQDRLWLAE RLLGSGDRPL SLAPEALAVL ASHLWPGNLR ELEHMAQTLR ALVPGAEVGL ADLPETIRAG TASGPGVPQA AGAVLAQVLR QTGGNVSEAA RRLGVNRSTI HRQIRRMGVT R
|
| |