Gene RSP_3301 details

Gene Information

• Locus tag: RSP_3301
• Symbol: eda
• ID: 3722003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007494
• Strand: +
• Start bp: 362410
• End bp: 363018
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640072970
• Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
• Protein accession: YP_354810
• Protein GI: 77465307
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase
• TIGRFAM ID: [TIGR01182] Entner-Doudoroff aldolase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.909537
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCGAC CGATCATCGC CATCCTGCGC GGCATCACGC CCGACGAAGT GGAACCCGTG 
GCCGCCTCGC TGATCGCCGC GGGCATCGAC CGGATCGAAG TGCCGCTCAA CTCGCCCGAC 
GCTCTGGACA GCGTGAGGCG TCTCGTCGAC CGCTTCGGAG AGCGCGCGCT GATCGGGGCG 
GGGACGGTGC TGTCGCCCGA GGATGTGCTG CGCGTGGCGG GCCTCGGCGC ACGGCTCGCG 
GTCTCGCCCG ACTGCAACGA GGAGGTCATC GCCGCCAGCA AGGCGCAGGG CCTCATCTCG 
GTGCCGGGCG TCTTCACGGC CACGGAGTGC TTCCGCGCAA TCCGCGCCGG GGCGGACGGG 
CTGAAGCTCT TCCCGGCCTC GCTCGCGGGC CCGGCTGGTC TTCAGGCGCT GCGGGCGGTT 
CTGCCGTCCA CGGTGCCTGT CTATGCGGTG GGTGGCACAG AGCCGGACTC CCTCGCCGTC 
TGGCAGAGGG CAGGGGCGGA CGGGTTCGGC ATCGGGACGG CGCTCTACCG GCCCGGTCGG 
GCGGCCTCCG ACGTGGCCGA TCGCGCCCGC CGCCTCGTCG CGGCCTTCGA CGCGGCCTAC 
GGCGTCTGA 

 

Protein sequence

MSRPIIAILR GITPDEVEPV AASLIAAGID RIEVPLNSPD ALDSVRRLVD RFGERALIGA 
GTVLSPEDVL RVAGLGARLA VSPDCNEEVI AASKAQGLIS VPGVFTATEC FRAIRAGADG 
LKLFPASLAG PAGLQALRAV LPSTVPVYAV GGTEPDSLAV WQRAGADGFG IGTALYRPGR 
AASDVADRAR RLVAAFDAAY GV