Gene RSP_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3297 
Symbol 
ID3721998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007494 
Strand
Start bp355940 
End bp357142 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content65% 
IMG OID640072965 
ProductABC branched-chain amino acid transporter, periplasmic binding protein 
Protein accessionYP_354805 
Protein GI77465302 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.300791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAAG CCCTTCTTTC TGCGGTGTCG CTGGCTGCCT TGGCCGCGCC TGCGGCAGCC 
CAGGTGTCGG ATGATCTTGT GAAGATCGGC ATCCTGAACG ACCAGTCCGG GGTCTATGCG
GACTTCGGCG GCAAATACAG CTACGAGGCC GCGCTGATGG CGGTCGAGGA TTACGGCGGT
TCGGTCCTCG GGAAGAAGGT CGAGGTCGTG ACGGCCGACC ACCAGAACAA GGCCGACATC
GCCTCGAACA TCGCGCGCCA GTGGTACGAC ACCGAGCAGG TCGACGCGAT CATGGAGCTG
ACCACCTCGT CGGTGGCGCT CGCCGTTCAG GCGCTGTCGC AGGAGAAGAA GAAGGTCACC
ATCACCACCG GGGCGGCCAC GACCGAGCTG ACGGGCAAGC AATGCTCTCC CTACGGCTTC
CACTGGGCCT ATGACACGCA CGCCCTGGCC ATCGGCACCG GCGGCGCGCT GGTCGAACAG
GGCGGCGACA GCTGGTATTT CCTCACCGCC GACTATGCCT TCGGCTATTC TCTCGAAGAG
AATACCGGCG CGGTCGTGAA GGAGAAGGGC GGACAGGTTC TCGGCGCCGT GCGCCATCCG
CTTTCCACCA CCGACTTCTC CTCGTTCCTG CTTCAGGCAC AGGCCTCCGG CGCCAAGGTC
ATCGGCCTCG CCAATGCGGG TCTCGATACG CAGAATGCCA TCAAGCAGGC GGGCGAGTTC
GGGATCGTGC AGGGCGGCCA GCGGCTTGCG GCGCTCCTCT TCACGCTGGC CGAGGTCCAC
GGGCTCGGCG TCGAGTCGGC GCAGGGCCTG ACGCTGACCG AGAGCTTCTA CTGGAACCGC
AACGAGGAAT CGGCCGAGTT CGGCAAGCGG TTCATGGAAC GGACCGGCGC GATGCCCAAC
ATGATCCATG CCGGCACCTA CTCGGCCGTG CTCTCCTATC TCAAGGCGGT CGAGGCCGCG
GGCACCGACG AGACCGAGGC CGTCTCGGCC AAGCTGCATG AGCTGCCGGT CGAGGATGTC
TTCGCCAAGG GCGGCAAGGT CGCGGCCAAC GGGCGCATGA TCTCGGACGT CTATCTGCTC
GAGGTGAAGA AGCCCGGCGA GAGCGACGTG CCGTGGGACT ATTACAACGT CCTCGCCACC
ATCCCGGGCG ATCAGGCCTA TCTCGACCCG GCCCAGAGCG GCTGCCCGCT CGTCACGAAT
TGA
 
Protein sequence
MRKALLSAVS LAALAAPAAA QVSDDLVKIG ILNDQSGVYA DFGGKYSYEA ALMAVEDYGG 
SVLGKKVEVV TADHQNKADI ASNIARQWYD TEQVDAIMEL TTSSVALAVQ ALSQEKKKVT
ITTGAATTEL TGKQCSPYGF HWAYDTHALA IGTGGALVEQ GGDSWYFLTA DYAFGYSLEE
NTGAVVKEKG GQVLGAVRHP LSTTDFSSFL LQAQASGAKV IGLANAGLDT QNAIKQAGEF
GIVQGGQRLA ALLFTLAEVH GLGVESAQGL TLTESFYWNR NEESAEFGKR FMERTGAMPN
MIHAGTYSAV LSYLKAVEAA GTDETEAVSA KLHELPVEDV FAKGGKVAAN GRMISDVYLL
EVKKPGESDV PWDYYNVLAT IPGDQAYLDP AQSGCPLVTN