Gene RSP_3294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3294 
Symbol 
ID3721995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007494 
Strand
Start bp353580 
End bp354467 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID640072962 
ProductABC branched-chain amino acid transporter, inner membrane subunit 
Protein accessionYP_354802 
Protein GI77465299 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0420921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACGA TCTTCGGCAT TCCGACGGCG GCCCTCTTCG GCCAGCTGCT GGTGGGTCTC 
ATCAACGGCT CGTTCTATGC GCTCCTGTCG CTGGGGCTTG CGGTGATCTT CGGCCTTCTC
CGGGTCATCA ACTTCGCCCA TGGCGCGCAA TATATGGCCG GCGCCTTCGC GGCGCTCCTC
CTGCTCACCC AGACCGGGAT CGGCTACTGG CCCGCGCTGA TCCTCGCCCC GCTCATCGTG
GGTCTGGGCG GCGCGCTGAT CGAGCGCACC ATGCTCTCGC GGCTCTACAA GCTCGACCCG
CTCTACGGGC TGCTCTTCAC CTTCGGCCTT GCGCTCACGC TCGAAGGCAC GTTCCGCTGG
TTCTTCGGCA CCTCGGGCCA GCCCTATTCG CCGCCGGCCG CACTGACCGG AGCGGTCAAT
CTCGGCTTCA TGTTCCTGCC GATCTATCGC GGCTGGGTGG TTGTGGCCTC GCTCGCCGTC
TGCCTCGGCG TCTGGCTTCT GATCGAAAAG ACGAAGCTCG GCGCCTATCT GCGGGCCGCG
ACGGAAAATC CGGTGCTGGT CCAGAGCTTC GGGGTCAATG TGCCGCTGCT TCTGACCTTC
ACCTACGGGC TGGGCGCGGC GCTCGCGGGC TTTGCGGGCG TGCTGGCCGC GCCGGTCTAT
CAGGTCTCGC CGCTCATGGG GTCGAACCTC ATCATCGTCG TCTTCGCGGT CGTCGTGGTG
GGAGGCATGG GCTCGATCCT CGGCGCGATC GTGACCGGCT ATCTGCTCGG CATCGCCGAG
GGGCTCACCA AGGTCTTCTA TCCCGAGGCC TCGAACATCG TGATCTTCGT CATCATGGCG
ATCGTCCTGA TCCTGCGGCC TGCGGGACTC TTCGGAAAGG ATGCGTGA
 
Protein sequence
MMTIFGIPTA ALFGQLLVGL INGSFYALLS LGLAVIFGLL RVINFAHGAQ YMAGAFAALL 
LLTQTGIGYW PALILAPLIV GLGGALIERT MLSRLYKLDP LYGLLFTFGL ALTLEGTFRW
FFGTSGQPYS PPAALTGAVN LGFMFLPIYR GWVVVASLAV CLGVWLLIEK TKLGAYLRAA
TENPVLVQSF GVNVPLLLTF TYGLGAALAG FAGVLAAPVY QVSPLMGSNL IIVVFAVVVV
GGMGSILGAI VTGYLLGIAE GLTKVFYPEA SNIVIFVIMA IVLILRPAGL FGKDA