| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3250 |
|---|
| Symbol | |
|---|
| ID | 3721852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | - |
|---|
| Start bp | 308129 |
|---|
| End bp | 308956 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640072920 |
|---|
| Product | ABC peptide transporter, inner membrane subunit |
|---|
| Protein accession | YP_354760 |
|---|
| Protein GI | 77465257 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0284368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCCG CGCTCGGCCT GCCCGTCCGC CGCCGCCCGA TGCTGGCCAT CGGGACCGCG
CTCCTTCTGG CCTTCCTCCT CGCGGCGCTG CTCGCGCCCT GGATCGCGCC CTTCGATCCG
ATCGCACAGG ACGGATCGAT CCGCCTGCAG CCGCCGAGCC TCGCCCATCC GTTCGGCACC
GACAATTTCG GCCGCGACGT GCTCTCGCGG GTGATCTGGG GCGCCCGGAT CGATCTGCAG
ATCGCAGTGC TGGGGGTGCT CTTTCCCTTC CTGATCGGCA CGGCCGTGGG CACGCTCGCG
GGCTTCTTCG GCGGCTGGAT CGACGCGCTC TTCATGCGCC TGATCGACGT GATCCTGGCC
TTCCCCTTCC TCGTCCTGAT GCTCTCGATC ATCGCGATCC TCGGGCCCGG GCTCACCAGC
TTCTACATCG CCATGGCGCT GGTGGGCTGG GTCTCCTATG CGCGGCTGAT CCGGGCGCAG
ATCCTCGTGC TCAAGACGCA GGATTTCGCG GTGGCGGCCC AGAGCCTCGG CTTCTCGCGC
ACCCGGATCA TGTTCCGCCA TCTGCTGCCC AATGCGCTGG CGGGCTCGCT CGTCTTCGTC
ATGTCGGACG CGGTGCTCGT GCTGCTCAAT GGCGCGGCGA TCAGCTACCT CGGGCTCGGG
GTGCAGCCCC CGCTCGCGGA ATGGGGGGTC ATGGTGGCGG AGGGTCAGGC CTTCATCACC
ACCGCCTGGT GGATCACCCT GTTCCCGGGC CTCGCCATCG TCACACTGGC CTTCGGCTTC
AGCCTGCTGG GCGACGCGCT CGGCGATCTT CTGGGGGTGA AGGAATGA
|
|---|
| Protein sequence | MIAALGLPVR RRPMLAIGTA LLLAFLLAAL LAPWIAPFDP IAQDGSIRLQ PPSLAHPFGT
DNFGRDVLSR VIWGARIDLQ IAVLGVLFPF LIGTAVGTLA GFFGGWIDAL FMRLIDVILA
FPFLVLMLSI IAILGPGLTS FYIAMALVGW VSYARLIRAQ ILVLKTQDFA VAAQSLGFSR
TRIMFRHLLP NALAGSLVFV MSDAVLVLLN GAAISYLGLG VQPPLAEWGV MVAEGQAFIT
TAWWITLFPG LAIVTLAFGF SLLGDALGDL LGVKE
|
|---|
| |