Gene RSP_3242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3242 
Symbol 
ID3721847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007494 
Strand
Start bp299440 
End bp300891 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content70% 
IMG OID640072915 
Productputative trypsin-like serine protease 
Protein accessionYP_354755 
Protein GI77465252 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.263085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATGC CCACCCCGCG TTCCTCGCTG AAGGCCGTCC TGATCGCCAG CACCCTCATC 
ACCGCCGGTG TCGCCGGCAC GGCCCTGCCG CCGACCGCGG CCCGGGCCGA GGTGCCGATG
CAGGGCTATG CCGATCTCGT CGCCCGCGTC TCGCCCGCCG TCGTCTTCAT CGAGGTGACG
GCCAAGTCGA AGGAGTCCAC GCCGATGGCG GGCTCTCCCT TCGAGGAATT CCTCCGCCGC
TTCGGCGAGA TCGACCCGCA GTTCCGCATG CCGCAGGCCC CCGAGGGCGG GCAGGTCATG
CACGGGCTCG GGTCGGGCTT CCTGATCTCG CAGGACGGCA TCATCGTCAC CAACAACCAT
GTGGTCGAAA ATGCGACCGA CATGAAGGTC AAGCTCGAGG ACGGCCGCGA GTTCAAGGCC
GAAGTCGTGG GCACCGATCC GATGACCGAC ATCGCGGTGA TCCGGCTGAA GGATGCCAAG
GACCTGCCCT TCGTCGAGCT TGGCGACAGC GAGAAGCTGC GCGTGGGGGA TGCGGTGGTG
GCCGTCGGCA ACCCGTTCGG GCTGGGCGGC ACCGTGACCT CGGGCATCGT CTCGGCCATG
GGGCGCAACA TCAACTCGGG CCCCTACGAC GACTACATCC AGACCGACGC GGCCATCAAC
CGCGGCAACT CGGGCGGCCC GCTGTTCGAC ACCGAGGGCA AGGTCGTCGG CATGAACACC
GCGATCTTCT CGCCCTCCGG CGGCTCGGTG GGCATCGGCT TCTCGATCCC CGCGAACACG
GTCAAGGATG TCGTGGCGCA GCTTCAGGAC AAGGGTTCGG TCTCGCGCGG CTGGCTCGGG
GTCACGGTTC AGGGCATGAC TCCCGAGATC GCTCAGGCCA TGGGGCTTGA GGGGCGCGAC
GGGGCCCTTG TGGCCGAGGT GCAGCAGGGT AGCCCCGCCG ACGAGGGCGG TCTCGAGAGC
GGCGACGTCA TCACGGCGGT GAACGGTCAG GAGCTGACGG AGCGGGCGAG CCTGCCGCGG
CTGATCGCGG CCATCCCGAA CGGCGAGAAA GCCCAACTCA CGGTCCAGCG CGATGGACGC
CAGCAGGAGA TGACCGTGAC GATCGGAGAA CTGACCCCCG ACCGGGCGCA GGTCGCCTCG
GCCGAGTCGC CCGAAGGGCT CGGCGGGCCG CTCGGCATCG AGGTCCAGCC GCTCGAGCCC
GCGCTGGCAC GCCAGCTCGG CCTGCCGGAC GGCGCCTCGG GCGTCGTGGT GACGGCGGTC
GATCCCTCGG GGCCGAACGC CGACCGGCTC GCGCCGGGCG ACGTGATCCA GGAAGCGGCC
GGCCACCCGA TCGAGACGCC GCGCGATCTG GCCTCGGCGA TGCGCGAGGC GCGCGGCAAG
GGCGTGATGC TGATGAAGGT GCTGCGGCAG GGCAACCCGG TCTATGTGGG CGCCGAAGTG
GCCTCGTCCT GA
 
Protein sequence
MPMPTPRSSL KAVLIASTLI TAGVAGTALP PTAARAEVPM QGYADLVARV SPAVVFIEVT 
AKSKESTPMA GSPFEEFLRR FGEIDPQFRM PQAPEGGQVM HGLGSGFLIS QDGIIVTNNH
VVENATDMKV KLEDGREFKA EVVGTDPMTD IAVIRLKDAK DLPFVELGDS EKLRVGDAVV
AVGNPFGLGG TVTSGIVSAM GRNINSGPYD DYIQTDAAIN RGNSGGPLFD TEGKVVGMNT
AIFSPSGGSV GIGFSIPANT VKDVVAQLQD KGSVSRGWLG VTVQGMTPEI AQAMGLEGRD
GALVAEVQQG SPADEGGLES GDVITAVNGQ ELTERASLPR LIAAIPNGEK AQLTVQRDGR
QQEMTVTIGE LTPDRAQVAS AESPEGLGGP LGIEVQPLEP ALARQLGLPD GASGVVVTAV
DPSGPNADRL APGDVIQEAA GHPIETPRDL ASAMREARGK GVMLMKVLRQ GNPVYVGAEV
ASS