Gene RSP_3195 details

Gene Information

• Locus tag: RSP_3195
• Symbol: rnfD
• ID: 3721803
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007494
• Strand: +
• Start bp: 248946
• End bp: 250034
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640072872
• Product: RnfD protein
• Protein accession: YP_354712
• Protein GI: 77465209
• COG category: [C] Energy production and conversion
• COG ID: [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
• TIGRFAM ID: [TIGR01946] electron transport complex, RnfABCDGE type, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCC CGCTCATCAT CTCGGGTCCC CATACCCACA CGCTCTTCAC CGTCTCGCGC 
ACCATGCTGA CGGTGAGCGC GGCGCTGGCG CCCGCCACGC TCTTCGGCCT GTGGATGTTC 
GGCTGGCCCG CGATCTTCCT CTTCCTCGTG ACGGTGGCCT CGGCCTGGCT GTTCGAGGTG 
GCCTGCCTCC GGGTCGCGGG CAAGCCCGTG GCGCGGTTCG CGGGCGACGG CTCGGCCATC 
TTGACGGGCT GGCTCGTGGC CATGACGCTG CCGCCCTATG CGCCTTGGTG GCTCGGCATG 
ACGGGCTCGG CCATCGCCAT CGTCATCGCG AAACATCTCT TCGGCGGCCT CGGCCAGAAC 
CTCTTCAACC CGGCCATGGT CGCCCGCGCC ATGCTGCTCA TCGCGCTGCC CGTCCACATG 
ACGACCTGGG TCGCGCCGGT GGGATTGCCC GAGGGGCCGG GCTTCCTCGA CGGCCTCGCC 
ATCACCTTCG CGGGTTCGCA GGAGTTCGAC GCGGTCTCGA GCGCGTCCAC GCTGAGCCAC 
ATCAAGAGCC AGATCGGCGC GGGCGCCACC ATGTCCGAGA TCGCGCCGGA TCTGTCCGAT 
CTCGAGGCGC GGCTGATCGG CCTCGTTCCG GGCAGCCTCG GCGAGACCAG CACGATCCTC 
CTTCTCCTCG GAGGCATCGC GTTGATGGCG CTGCGCATCA TCACGCCGGT GATCCCACTC 
TCGGTGCTGG GCACGCTGGC CGGGCTCTCG GCGGTGGCCT CGACCCTCGC CCCCGACCGG 
TTCGCGCCGC CGCTCCTGCA TCTGACCTCG GGCTCGACGA TGCTCTGCGC CTTCTTCATC 
GCGACCGACT ATGTGACCTC GCCGGTCACT GCGATGGGCA AGCTCGTCTA TGGCGTGGCG 
ATCGGCGCGC TCGTCTTCGT GATCCGCACC TGGGGATCGT TCCCTGAGGG CGTGGCCTTC 
GCGGTGCTTT TGATGAATGC CTGCACGCCG CTGATCGAAA CCTATGTGCG CCCGCGCGTC 
TTCGGCCGCA CCCGGACGGG CAAGTCCCTG CCGGTCAAGG CCCGGACGCC GCGCGGAGGG 
AAGAGATGA 

 

Protein sequence

MTAPLIISGP HTHTLFTVSR TMLTVSAALA PATLFGLWMF GWPAIFLFLV TVASAWLFEV 
ACLRVAGKPV ARFAGDGSAI LTGWLVAMTL PPYAPWWLGM TGSAIAIVIA KHLFGGLGQN 
LFNPAMVARA MLLIALPVHM TTWVAPVGLP EGPGFLDGLA ITFAGSQEFD AVSSASTLSH 
IKSQIGAGAT MSEIAPDLSD LEARLIGLVP GSLGETSTIL LLLGGIALMA LRIITPVIPL 
SVLGTLAGLS AVASTLAPDR FAPPLLHLTS GSTMLCAFFI ATDYVTSPVT AMGKLVYGVA 
IGALVFVIRT WGSFPEGVAF AVLLMNACTP LIETYVRPRV FGRTRTGKSL PVKARTPRGG 
KR