| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3194 |
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| Symbol | rnfC |
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| ID | 3721802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | + |
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| Start bp | 247396 |
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| End bp | 248949 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640072871 |
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| Product | 4Fe-4S ferredoxin, RnfC |
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| Protein accession | YP_354711 |
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| Protein GI | 77465208 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTTC CCCATTTCGC GGCCCTCTTC CGGCCCTCGC AGTTCTTCGG CATCCGCGGC
GGCGTCCACC CCGAGACGCG CAAGCATCTG AGCTCGGAAA GCCCCATCGA GGACATGCCG
ATCCCCACGC TGATCCGCGT GCCGCTCCAG CAGCATATCG GCGCCGAGGC CGAGCCGCTG
GTCAGGCGCG ACGATCTGGT GGTGAAGGGC CAGCTGATCG GGCGCGCCCG CGGCCCGGTC
TCGGCCAACA TACACGCGCC GACCTCGGGC CGGGTGATCG CGGTGGGCCA TTTCGCGGCT
CCCCATCCCT CGGGGCTGCC CATTCCCACC ATCACCATCC GCACCGACGG GCAGGACAGC
TGGGGGCCCC GGCTGGGTCG CCTCCGGCCC GAGAATGCCA CCCCCGAGGA GATCGCGGCC
AAGGTGGCCG AGGCGGGGAT CGTGGGCATG GGCGGCGCCA CCTTCCCCTC GGCGGTGAAG
CTGAACCTGC GGGCGAAATA CGACCTCCAT ACGCTCGTCA TCAACGGGGC GGAATGCGAG
CCCTACCTCA CCTGCGACGA CCGGCTGATG CGCGAGCGGG CCGAGGAGAT CGCCGACGGC
GTGGGGATCA TGGCAAGGGC TCTGGGCGTG ACGCAGATCG TCGTGGCCAT CGAGTCGAAC
AAGGCCGAGG CGATCTCGGC CATGCAGCGC TTCGACCGCG CGCTCGACAT CCCGCTCCGG
GTGCAGGTGG TGCCGACCCA GTATCCGATG GGCTCGGAGA AGCATCTGGT GAAGATCCTG
ACCGGGCGCG AGACGCCGGC GCGGGCGCTG ACGGCCGATC TGGGCGTCGT CGTCCACAAT
GCCGCCACCG CCCATGCCGT CCATCTCGCG GTGCGCTACG GCGAGCCTCT CCTGTCGCGC
GTGGTCACGG TCTCGGGCCG GGCGGTGCGG CGGCCTGCCA ATGTGCGCGT CCTGATCGGC
ACGCCGGTGT CTGAGGTCGT CGCCCATTGC GGCGGCTATG CCGAAGAGCC CGACCGGCTG
CTTCTCGGCG GGCCGATGAT GGGCCAGCCG ATCCAGAACC TGCGCGTGCC GGTGGTGAAG
GGCACAAGCG GCATCCTCGC CCTGACGCGC GCCGAGACCC CCGGCGTCGA TACGATGCCC
TGCATCCGCT GCGGGCGCTG TGCGCAGGCC TGCCCCGTGG GCCTCACGCC CTTCGAACTC
AATGCCCGCA TCCAGTCCGA GGATCTCGAG GGGGCGGGGC GGATCGGGCT TCTCGACTGC
ATCACCTGCG GCTGCTGCTC CTTCACCTGC CCCTCGAACC TCCCGCTCGT GCAGACGATC
CATTACGCCA AGGGCAAGCT CGCCGAGGCC GAGGGGCGCA GGCACCAACA GGAAGAGACG
AAGCGCCTCG CCGCCGCGCG GAAGGCGCGC GAGGAGGCCG CGGCCGAGGC CAAGCGGCAG
ATGATGGCGA AACGCAAGGC CGAGATGGAG GCCAGGAAGC AGCGCGAGGC CGCCGCGCCC
CCGCCGCCAC CGCTCGCTCA GGCGATGGCC CAGCCCGGAG GTGCCGCGCA ATGA
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| Protein sequence | MSFPHFAALF RPSQFFGIRG GVHPETRKHL SSESPIEDMP IPTLIRVPLQ QHIGAEAEPL
VRRDDLVVKG QLIGRARGPV SANIHAPTSG RVIAVGHFAA PHPSGLPIPT ITIRTDGQDS
WGPRLGRLRP ENATPEEIAA KVAEAGIVGM GGATFPSAVK LNLRAKYDLH TLVINGAECE
PYLTCDDRLM RERAEEIADG VGIMARALGV TQIVVAIESN KAEAISAMQR FDRALDIPLR
VQVVPTQYPM GSEKHLVKIL TGRETPARAL TADLGVVVHN AATAHAVHLA VRYGEPLLSR
VVTVSGRAVR RPANVRVLIG TPVSEVVAHC GGYAEEPDRL LLGGPMMGQP IQNLRVPVVK
GTSGILALTR AETPGVDTMP CIRCGRCAQA CPVGLTPFEL NARIQSEDLE GAGRIGLLDC
ITCGCCSFTC PSNLPLVQTI HYAKGKLAEA EGRRHQQEET KRLAAARKAR EEAAAEAKRQ
MMAKRKAEME ARKQREAAAP PPPPLAQAMA QPGGAAQ
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