| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3145 |
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| Symbol | ttdB |
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| ID | 3721437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 195037 |
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| End bp | 195717 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640072822 |
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| Product | putative tartrate dehydratase beta subunit |
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| Protein accession | YP_354662 |
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| Protein GI | 77465159 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
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| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACCGTT CCGCAGGACC AAAACGAATT CGCCTGAGCA CCACCCCCTC GCGGGAGGAT
CTGGCCCGGC TGCACATCGG CGATGTCGTG CATCTGGACG GGCTGATCTA TACCGCGCGC
GAGGGCGTCT ACATGCGCGC CTGCGAGCAG GGTGACGCGC TGCCCATGGA TCTGCCGCGC
GAGAGCGCCG CGAACTTCCA CTGCTCGCCC GCGGCAACGG TCGAGCCCGA CGGCTCCTTC
ACCATGGGCG CGGTCACCGC CACCGCCTCG TTCCGCTTCA GCAAGTGGAT CGGCGAGTGG
TTCCGCCTGT CGGGCGCGAA GCTCATCATC GGCAAGGGCG GCATGACCTC GGCCGACTAC
CGCGAGCATT TCGTGCCGAA CGGCGCGATC TACCTCACCA CCGTGGGCTA TGGCACGGGC
GCGCTGCTCG GACGCGGCAT CAAGCGGGTG AAGGCGCTCC ACTGGCGCGA GGATCTGGGG
CTCGCGCAGG CCATGTGGGT GCTCGAGGCC GAGAACATGG GCCCCTTCAT CGTCGAGAGC
GACCTCGAGG GCAACAGCCT CTTCGAGCGC GAGAACGAGC GCGTCTCGCA GAACCTCGCC
CGCGTCTACG AGGGTACGAA GCCCGCCGTG CTGCGCCGCT TCGGCGAGAC CGACGACCGC
AGCGATGAAT TGATCGGATG A
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| Protein sequence | MDRSAGPKRI RLSTTPSRED LARLHIGDVV HLDGLIYTAR EGVYMRACEQ GDALPMDLPR
ESAANFHCSP AATVEPDGSF TMGAVTATAS FRFSKWIGEW FRLSGAKLII GKGGMTSADY
REHFVPNGAI YLTTVGYGTG ALLGRGIKRV KALHWREDLG LAQAMWVLEA ENMGPFIVES
DLEGNSLFER ENERVSQNLA RVYEGTKPAV LRRFGETDDR SDELIG
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