| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3101 |
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| Symbol | |
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| ID | 3721376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 143700 |
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| End bp | 146018 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640072776 |
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| Product | periplasmic sensor diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_354617 |
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| Protein GI | 77465114 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAG CACGTTCCCT GCAGGACGGT TCGGAGATCC GCCGGACGGG CCAGGCTGCC
CGTTCCAGCC CCTCGACCGG CAGGTCAGCG GCGCCCGTGG GCCGTCAGGA GGTGAGTATG
GACAAGCCCC GTGCGCCTGC CTCGTTCTCG GCGCAGCTTG TCGCGGCCAT CCTGTTCGCC
TGCCTCGTGG CCACGCTGTC GGTGCTCTTT CTGAGTTCCA CGGCGGTGAA CGCGGTCGAT
GCGGATGCCG AGGCCCGACA GATCCGCTTC GCCCAACGCG CCCTCCTGCG CGAGACCCGC
GAGCTTCTCC AGCAGCAGCA GGCTTCGACG GTCTGGGACG AGTCGGTGGT TCATGTCCGC
GCCGGCGACC GCGACTGGAT CGACTCCAAC CTCGGCACCT GGATGCATGA GGAATACGGG
CAGGACGAGA CCTACATCGT CGATCCGGCC TCGCGGATCG TCTATGTCGC GCGCGAGCGG
GTGACCGGGC AGCCCGGCCC CCGGGCGACC CTGCCGCCGG CCGTCGAGGA GATGGTCGAG
GAGATGCGGC CGATGATGCG CGCGGCGACC CGCAACCGGG CCGATTCCAC GGCCGATGTG
GCCGACCTGT CGCTCAGCCG CTTCGTGCTT CTGGGCGGCA AGCCCGCGCT GGTGAGCGTG
GTACCCATCG TGCCGGACAC GCCCGCGGTG GTGCAGGCGG CAGGCACGGA ATATCTGCAT
GTCGCGGTTC AGATGGCCGA TGCCGACATG GCCGCGCGCC TCTCGAACAC CTATGAGTTC
GACCGCGGCT CTTTCTCGGT TCAGCCCGGA CCCGAAGACC GACTCTCCGT GCCGCTGCGC
GACGGGGCGG GGCGGCCCAT CGCCTGGTTC GTCTGGCGGG CAGACCGCCC CGGGCACCGG
ATCGTCGATG AGATGCTGCC CGTGGTGGGC CTGTTCGCGG CCTTCGGCGC CGCCCTTCTG
ACCTGGCTCC TGCGCACGCT CTGGACCGCG TCGCGGCGGC TGCACCAGAG CGAGGAGGAA
GCGCGCTATC TGGCGATGCA CGATCCGCTG GCGGGCATCC CCAACCGCAC GCTGTTCGAG
GACCGGCTGG ATCAGGCGCT CAAGGCCGAA CGACGCGGGG GTCCGCCGGT GGCCCTGCTC
TGCCTCGACC TCGACCGGTT CAAGGCGGTC AACGACACGA TGGGCCATCA GGCCGGCGAC
GAGCTCATCC GGCAGATGGC GGCGCGGCTG CGCTCGCATG TCCGCGAAAC GGACACGGTG
GCCCGGCTCG GCGGCGACGA GTTCGGCGTG ATCCTGATCG GGATGGCCAG CGACGAGACG
CTCGGACGCT ATTGCAGCGG CCTCGTGCAT CTGCTGGCGG CCCCCTGCGA CCTCAAGTGC
GGGCAGGTCC AGATCGGCGC GAGCATCGGC GCCGTGCGCG CGGCCAGCGT GGACGGCGGC
AGGGAGGCCA TCCTGCGCAG CGCCGACACG GCTCTCTACC GCGCCAAGGC CGAGGGGCGC
GGACGCTACT GCATCGCCAC GCCCGAGATG AACGACATCT TCCGCCGCCG CCACGAGATC
GAGCGCGACC TGCGCGAGGC CGTCGCCGAG GGCGGGCAGA TCCATGTGCT CTACCAGCCC
ATCTTCGATG CCGAGGAACG GATCGTGGCG GCGGAGGCGC TGGTGCGCTG GAACCACCCG
ATCCTCGGGC AGATGGGCCC GGAGACCTTC CTCTCCATCG CCGAGGAGAC CGGCCTGATC
GATCGGATCG GCCACCATGT CCTCGAACAG GCCTGCATCC TTGCCGCCAC CTCGGGCATT
CCGCGGGTCT CGGTCAATAT CTCGCCGGTG CAGCTGCGCC AGGAGACCTT CGCCGACGAG
GTTCTGGCGG TGATGGCGGC GCATTCCCTT TCGGGCGAAC GGCTCGTGCT GGAACTGACC
GAGAAATTCA CGCTCGACGC GGGCCCTGCG ACGCTGGCCA ATCTGGCACG TCTGCGCGCA
GCGGGCGTGT CGATTGCGCT CGACGATTTC GCGACCGGCC AGTCGCTCCT GCGCTATGTG
CGCGACTACC AGATCGACAC GATCAAGATC GACCGCTCCT ATGTGGCGCG GCTCGGCACC
GGCGACGGCA CCGACCAGAT CGTGCGCGCG ATCCTCGACC TCGGCCGCGC CATGGGCATC
GAGGTCACGG CCGAGGGGGT CGAGCGCGCG TCCCAGCGCG AGGCGCTTCT CGGCATGGGC
TGCCACGGCT TTCAGGGCTA TCTGCTCGGC CGGCCGATGG ATCCGCTGCG GCTCGCGGCG
CTGAGCGCGC GCAAGGGCGT CGCGCAGAAG AGCGCCTGA
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| Protein sequence | MNAARSLQDG SEIRRTGQAA RSSPSTGRSA APVGRQEVSM DKPRAPASFS AQLVAAILFA
CLVATLSVLF LSSTAVNAVD ADAEARQIRF AQRALLRETR ELLQQQQAST VWDESVVHVR
AGDRDWIDSN LGTWMHEEYG QDETYIVDPA SRIVYVARER VTGQPGPRAT LPPAVEEMVE
EMRPMMRAAT RNRADSTADV ADLSLSRFVL LGGKPALVSV VPIVPDTPAV VQAAGTEYLH
VAVQMADADM AARLSNTYEF DRGSFSVQPG PEDRLSVPLR DGAGRPIAWF VWRADRPGHR
IVDEMLPVVG LFAAFGAALL TWLLRTLWTA SRRLHQSEEE ARYLAMHDPL AGIPNRTLFE
DRLDQALKAE RRGGPPVALL CLDLDRFKAV NDTMGHQAGD ELIRQMAARL RSHVRETDTV
ARLGGDEFGV ILIGMASDET LGRYCSGLVH LLAAPCDLKC GQVQIGASIG AVRAASVDGG
REAILRSADT ALYRAKAEGR GRYCIATPEM NDIFRRRHEI ERDLREAVAE GGQIHVLYQP
IFDAEERIVA AEALVRWNHP ILGQMGPETF LSIAEETGLI DRIGHHVLEQ ACILAATSGI
PRVSVNISPV QLRQETFADE VLAVMAAHSL SGERLVLELT EKFTLDAGPA TLANLARLRA
AGVSIALDDF ATGQSLLRYV RDYQIDTIKI DRSYVARLGT GDGTDQIVRA ILDLGRAMGI
EVTAEGVERA SQREALLGMG CHGFQGYLLG RPMDPLRLAA LSARKGVAQK SA
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