Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3081 |
Symbol | |
ID | 3721357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 124697 |
End bp | 126400 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640072757 |
Product | ABC multidrug efflux transporter, fused ATPase and inner membrane subunits |
Protein accession | YP_354598 |
Protein GI | 77465095 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCGTG ACTTCTTCAC CTATTACCGG CCGTGGCTCG GCCTCTTCTG GCTCGACTTC GGCTGCGCCA TAGCCTCGGG GCTGCTGGAA CTTGCCTTCC CGCTTGCGGT GCAGGGCTTC ATCGACCGTC TGCTGCCGCA GGGCGACTGG AGCCTGACCA TCCTTGCTGC AGCGGGGCTT CTTGCGATCT ATCTCGTGAA CACCGGGCTC ATGGCGATCG TGACCTACTG GGGCCACATG CTCGGGATCA ACATCGAGAC CGAGATGCGC CGGCGCGCCT TCGAGCATCT CCAGAAGCTC TCGTTCCGCT ACTTCGACCG GGTGCGGACC GGCAAGCTCG TGGCGCGGGT GACGCGCGAT CTCGAGGAGA TCGGCGAGGT GGCCCACCAC GGGCCCGAGG ATCTCTTCAT CGCGATCATG ACCTTCATCG GCGCCTTCCT CCTGATGCTC GCGATCAATG TGAAGCTCGC GCTTCTGACC GCGCTGGTGG TTCCGGCCAC GGTGGCGCTC GTCTCGATCT ACGGCGGCCG CATGACCGCG ACCTGGCGCG CGATCTATGC GCGGGTGGCC GACTTCAACG TGCGGCTCGA GGAGAATGTG GGCGGCATCC GCGTGGTGCA GGCCTTCGCC AACGAGAGCC ACGAGAAGGC GCTCTTCGCC CGCGACAATG CCCGCTACCG CGACACCAAG CTCGCGGCCT ACCGGGTGAT GGCCGCCTCG CAGGCGCTGA ACTACATGGG AATGCGCTCG GTGCAGGTGA TCGTCATGGT CGCGGGCGCG GCCTTCGTGC TCTCGGGCGA GCTGACGACC GGGGGCTTCG TGGGCTTCCT GTTGCTCGTC AGCGTGTTCT TCCGCCCGCT CGAGAAGATC GCCGCCGTGA TCGAGACCTA CCCGCGCGGC ATCGCGGGCT TCCGCCGCTA CCGCGAGCTG CTGGACACCG AGCCGGAGAT CGCCGATGCC CCCGGCGCCC GGCCCGCACC CGCCCTGACC GGCGAGATCC GCTTCGAGGG GGTGGGCTTC GGCTATGACC AGGGCCGCCC GGTGTTGAGC GGGATCGACC TCTCGGTGCG GCCCGGCGAG ACCCTGGCCT TCGTCGGCCC CTCGGGGGCG GGCAAGACCA CGCTTCTGGC GCTCGTGCCG CGCTTCTACG ACCCCGAATG CGGCCGCATC ACCATCGACG GCATGGACCT CACCGACATG ACGCTCGAGA GCCTGCGCCG TCGGATCGGC ATCGTGAGCC AGGATGTGTT CCTGTTCGGC GGCACGCTGC GCGAGAACAT CGCCTACGGG CGGCTCGAGG CGACCGAGGC CGAGATCCGC CGCGCGGCCG ATCAGGCGCA GCTCGGGCCG ATGATCGCCG CCCTGCCGGA GGGGCTCGAC ACGGTGGTGG GCGAGCGCGG CGTGATGCTC TCGGGCGGGC AGAAGCAGCG CGTGGCCATT GCACGGGCCT TCCTGAAGAA CCCGCCGATC CTGATCCTCG ACGAGGCGAC CTCGGCGCTC GACACCGAGA CCGAGCGCGA GATTCAGGCG GCGCTCGACG CGCTAGCGGT GGGGCGCACC ACCCTCATCA TCGCCCACCG CCTGGCCACC ATCCGCCACG CCGACCGGAT CGTGGTGATG GAGGCGGGCC GGATCGTCGA GGTCGGCACC CATGCCGAAC TCGCCACGAG CGGCGGGCGC TACGCGCGGC TCTCGGCCGC CTGA
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Protein sequence | MLRDFFTYYR PWLGLFWLDF GCAIASGLLE LAFPLAVQGF IDRLLPQGDW SLTILAAAGL LAIYLVNTGL MAIVTYWGHM LGINIETEMR RRAFEHLQKL SFRYFDRVRT GKLVARVTRD LEEIGEVAHH GPEDLFIAIM TFIGAFLLML AINVKLALLT ALVVPATVAL VSIYGGRMTA TWRAIYARVA DFNVRLEENV GGIRVVQAFA NESHEKALFA RDNARYRDTK LAAYRVMAAS QALNYMGMRS VQVIVMVAGA AFVLSGELTT GGFVGFLLLV SVFFRPLEKI AAVIETYPRG IAGFRRYREL LDTEPEIADA PGARPAPALT GEIRFEGVGF GYDQGRPVLS GIDLSVRPGE TLAFVGPSGA GKTTLLALVP RFYDPECGRI TIDGMDLTDM TLESLRRRIG IVSQDVFLFG GTLRENIAYG RLEATEAEIR RAADQAQLGP MIAALPEGLD TVVGERGVML SGGQKQRVAI ARAFLKNPPI LILDEATSAL DTETEREIQA ALDALAVGRT TLIIAHRLAT IRHADRIVVM EAGRIVEVGT HAELATSGGR YARLSAA
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