Gene RSP_3074 details

Gene Information

• Locus tag: RSP_3074
• Symbol: ilvD
• ID: 3721350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007494
• Strand: -
• Start bp: 115149
• End bp: 116987
• Gene Length: 1839 bp
• Protein Length: 612 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640072750
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_354591
• Protein GI: 77465088
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.611367
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCAT TTCGTTCCCG CACCAGCACG CATGGCCGCA ACATGGCCGG AGCCCGTGGC 
CTCTGGCGCG CGACCGGCGT GAAGGACAGC GACTTCGGCA AGCCGATCAT CGCCATCGTG 
AACAGCTTTA CCCAGTTCGT GCCGGGCCAC GTCCACCTCA AGGATCTGGG CCAGCTCGTG 
GCGCGCGAGG TCGAGGCCGC AGGCGGCATC GCCAAGGAAT TCAACACCAT CGCCGTCGAT 
GACGGGATCG CCATGGGCCA TGACGGGATG CTCTATTCCC TGCCCTCGCG CGAGCTCATC 
GCGGACTCGG TCGAATACAT GGTCAACGCC CATTGCGCCG ACGCGATGGT CTGCATCTCG 
AACTGCGACA AGATCACCCC CGGCATGCTG ATGGCCGCGA TGCGGCTGAA CATCCCCGCG 
GTCTTCGTCT CGGGCGGGCC GATGGAGGCG GGCAAGGTCA CGCTCGGCGA CGGGCGCACC 
GTGAAGATGG ACCTGATCGA CGCGATGGTG GCCGCCGCCG ACGAGAAAGT GTCCGACGAC 
GACCTGACCC GCATCGAGCA GGCCGCCTGC CCCACCTGCG GCTCCTGCTC GGGCATGTTC 
ACCGCCAACT CGATGAACTG CCTGACCGAG GCGCTCGGCC TGTCGCTGCC GGGCAACGGC 
TCGACGCTGG CCACGCACGC CTACCGCAAG GAGCTCTTCC TCGAGGCCGG GCGCCGCGCG 
GTCGAGCTCT GCCGCCGCTA CTACGAGCAG GAGGACGAGG GCGTCCTGCC GCGCGCCATC 
GCTACCAAGG AAGCGTTCGA GAATGCGATG GCGCTCGACA TCGCGATGGG CGGCTCGACC 
AACACGGTGC TCCATATCCT CGCCGCCGCC CAGGAAGGCG GCGTCGATTT CACCATGGAC 
GACATCGACG CGCTCTCCCG CCGGGTGCCC TGCCTCTGCA AGGTCGCGCC GAACAAGGCG 
GACGTGCATA TCGAGGACGT GCACCGCGCG GGCGGCATCA TGTCGATCCT GGGCGAGCTC 
GACCGCGGCG GGCTTCTGCA CCGCGACACC CGCACCGTCC ATGCGCCGAC CCTCGGCGCC 
GCCATCGACC AGTGGGACAT CGGCCGCTCC AACGCGCCCG AGGCGCGCGA GCTGTTCCTC 
GCGGCGCCGG GCGGCGTGCC CACGCAGGTG GCCTTCAGCC AGTCCTCGAC CTGGGACACG 
CTCGACACCG ACCGCGAGAC CGGCGTGATC CGCTCGGTCG CGACCCCCTT CTCGAAGGAC 
GGCGGCCTCG CGGTGCTGAA GGGCAACCTC GCGCCCGACG GCTGCATCGT GAAAACGGCG 
GGCGTGGACG AGTCGATCCT CGTCTTCGCC GGGCCCGCCA AGGTGTTCGA GAGCCAGGAC 
GCGGCCGTCT ACGGCATCCT GAACGGCGGC GTGCAGGCGG GCGACGTGGT GGTGATCCGC 
TACGAGGGCC CGAAGGGCGG CCCCGGCATG CAGGAGATGC TCTATCCGAC CTCCTACCTG 
AAGTCGAAGG GGCTGGGCAA AGCCTGTGCG CTCATAACCG ACGGGCGTTT CTCGGGCGGC 
ACCTCGGGGC TCTCCATCGG CCATGCCTCG CCCGAGGCGG CGTCGGGCGG CCCCATCGGC 
CTCGTGCGCG AGGGCGACCG GATCGAGATC GACATCCCGA ACCGCACCAT CACGCTGGCC 
GTGCCGGAGG CCGAGCTGGC CGCCCGCCGT GCCGAGCAGG ATGCGAAGGG CTGGAAGCCC 
GCGGGCCCGC GCAAGCGCAA GGTCTCGCAG GCGCTGAAGG TCTATGCGCA GTTCGCCTCC 
TCGGCCGACA AGGGAGCCGT GCGCGTCCTG CCGGAGTGA 

 

Protein sequence

MPAFRSRTST HGRNMAGARG LWRATGVKDS DFGKPIIAIV NSFTQFVPGH VHLKDLGQLV 
AREVEAAGGI AKEFNTIAVD DGIAMGHDGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MAAMRLNIPA VFVSGGPMEA GKVTLGDGRT VKMDLIDAMV AAADEKVSDD 
DLTRIEQAAC PTCGSCSGMF TANSMNCLTE ALGLSLPGNG STLATHAYRK ELFLEAGRRA 
VELCRRYYEQ EDEGVLPRAI ATKEAFENAM ALDIAMGGST NTVLHILAAA QEGGVDFTMD 
DIDALSRRVP CLCKVAPNKA DVHIEDVHRA GGIMSILGEL DRGGLLHRDT RTVHAPTLGA 
AIDQWDIGRS NAPEARELFL AAPGGVPTQV AFSQSSTWDT LDTDRETGVI RSVATPFSKD 
GGLAVLKGNL APDGCIVKTA GVDESILVFA GPAKVFESQD AAVYGILNGG VQAGDVVVIR 
YEGPKGGPGM QEMLYPTSYL KSKGLGKACA LITDGRFSGG TSGLSIGHAS PEAASGGPIG 
LVREGDRIEI DIPNRTITLA VPEAELAARR AEQDAKGWKP AGPRKRKVSQ ALKVYAQFAS 
SADKGAVRVL PE