| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3072 |
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| Symbol | sndh |
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| ID | 3721348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 112532 |
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| End bp | 113821 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640072748 |
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| Product | putative L-sorbosone dehydrogenase |
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| Protein accession | YP_354589 |
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| Protein GI | 77465086 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.726244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCC TGGCGCGTGC CACCGCCATC GTCGGCAATA CGATGGTCCT GATGCGGCGG
TTCGGATCGC CGGGCACCCA GGCGATCGGG CAGAGCCCGG CCATCCCCGA GGCCCAGAAG
CAGGGCATCA TGACCCTCAA GATGCCCGCG GCCAAGGGCT GGGCGCCGGG CCATCTGCCG
ACGCCCGCAC CGGGCCTCAA GGTCAATGCC TTCGCCCGCG ATCTGGAACA TCCGCGCTGG
ATCGAGGTGC TGCCCTCGGG CGACGTGCTG GTTGCCGAGG CGCGCCAGCT TCCCACCCCG
CCGAAGACCC TCCTCGACCG TGCGGCGCAG GCCACCATGC GCCGCATCCG CGCGCTCGGC
GACAGCCCGA ACCGCATCAC CCTCCTGCGC GACCCGGACG GCCGGGGCGA GGCGCAAGAG
CGCGAGACCT TCCTCGAGAA CCAGAGCCAG CCCTTCGGCA TGGCGCTGGT GGGCGACACC
TTCTACGTCG GCAACACCGA CGGCATTATG GCCTTCCCCT ACCGTCCGGG CGCCACGCGG
CTCGAGGGGC CGGGACGGCG CCTGACCACC TTCAAGCCCG GCGGGCACTG GACGCGCAGC
CTGATCGTCT CGCCCGACGG GCGCCGGATC TATGCCGGCG TGGGCTCGCT CAGCAACATC
GGCGACGACG GGATGGAGGC CGAGGAGGGC CGCGCCGCGA TCTGGGAGCT GGACCTCGCC
AGCGGTCAGG CCCGGATCTA TGCCTCGGGC CTGCGCAACC CGGTGGGCCT CGCGTGGGAG
CCCACGACGC GCGTGCTCTG GACCGTGGTC AACGAGCGCG ACGGGCTCGG CGACGAGACC
CCGCCGGACT ATCTGACCTC CGTCGAGGAG GACGGCTTCT ACGGCTGGCC CTATTGCTAC
TGGAACCGGA TCGTCGACGA CCGCGTGCCG CAGGACCCGG CGATGGTCGC CCGCGCGATC
ACGCCCGACT ATGCGCTCGG CGGACACACG GCCTCGCTCG GCCTCTGCTG GGTGCCGGCG
GGCACGCTGC CGGGCTTCGG CGACGGGATG GCCATCGGCC AGCACGGCTC GTGGAACCGT
TCGAAACTCA GCGGTTACCG GCTGATCTTC GTGCCCTTCG CGAACGGCCG GCCCTCCGGC
CCGCCGCGGG ACATCCTGAC CGGTTTCCTG TCCGACGACG AGAAGCTGGC CTACGGTCGC
CCGGTCGGCG TGGCGGTGGG CCCCGACCGC CGCTCGCTTC TGCTCGCCGA CGATGTGGGC
GACGTGATCT GGCGCGTAAC CGGCGCCTGA
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| Protein sequence | MDFLARATAI VGNTMVLMRR FGSPGTQAIG QSPAIPEAQK QGIMTLKMPA AKGWAPGHLP
TPAPGLKVNA FARDLEHPRW IEVLPSGDVL VAEARQLPTP PKTLLDRAAQ ATMRRIRALG
DSPNRITLLR DPDGRGEAQE RETFLENQSQ PFGMALVGDT FYVGNTDGIM AFPYRPGATR
LEGPGRRLTT FKPGGHWTRS LIVSPDGRRI YAGVGSLSNI GDDGMEAEEG RAAIWELDLA
SGQARIYASG LRNPVGLAWE PTTRVLWTVV NERDGLGDET PPDYLTSVEE DGFYGWPYCY
WNRIVDDRVP QDPAMVARAI TPDYALGGHT ASLGLCWVPA GTLPGFGDGM AIGQHGSWNR
SKLSGYRLIF VPFANGRPSG PPRDILTGFL SDDEKLAYGR PVGVAVGPDR RSLLLADDVG
DVIWRVTGA
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