Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3038 |
Symbol | |
ID | 3721623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 72551 |
End bp | 73354 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640072713 |
Product | ABC permidine/putrescine transporter, inner membrane subunit |
Protein accession | YP_354554 |
Protein GI | 77465051 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATCT ATGCCATCGC CGTCTACCTG TTCCTCTACA TTCCCATCGG CATCATCGCG CTGTTCTCGC TGAACGCCGG GCGGCACGCC ACCCAGATGA CCGGCTTCTC GCTGCAATGG TATGCCAGGG CGCTGGACAA TCCCTTCGTC CTCGAGGCGC TGAAGACCAG TTTCACCGTG GCGCTGGCCT CGGCGCTCTG CGCCACCGTC GCCGGCACTC TGGCTGCGGT CGCGCTGCAG GGTGTCAGGG GGCGGTTGCG CACGCTCTAC GATGCGGCGC TCTACATGGC GGTGATGGTG CCCGGCATCG TGATCGGCAT CGCCACCCTG ATCGCTCTGG TCACGGTCTT CGATCTCCTG AACCCGGTGC TGACCGGTCT CCTTGGAGAC GGCGCGCCGC AGCTCGGGCT CGGCAAGGGC TCGCTGGTCG CCGCGCACGG GCTCTTCACC ATGGCGCTGG TGGTGGTGAT CGTCCGTGCC AGATTGCAGG GCATGGACGC GAGCCTGATG GAGGCCGCCG CCGATCTGGG CGCGCCGCCC TTCCGCAGCT TCCTGCAGAT CACCCTGCCC CAGATCGCGC CCGCGGTGCT GGCAGGCTTC CTGCTCGCCT TCACCTTCAG CTTCGATGAC TTCATCATCG CCTTCTTCGT CGCCGGGTCC GAGACGACGC TGCCGATCTA TGTCTTCTCC TCGATCCGCC GCGGCGTGAC CCCCGAGATC AATGCCATCG GCACGATGGT GCTCCTCGCC TCGCTCGTCC TGCTGATCAC CGCCCAGGTG ATCCTGCGCC GCCGCGCGCG CTGA
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Protein sequence | MRIYAIAVYL FLYIPIGIIA LFSLNAGRHA TQMTGFSLQW YARALDNPFV LEALKTSFTV ALASALCATV AGTLAAVALQ GVRGRLRTLY DAALYMAVMV PGIVIGIATL IALVTVFDLL NPVLTGLLGD GAPQLGLGKG SLVAAHGLFT MALVVVIVRA RLQGMDASLM EAAADLGAPP FRSFLQITLP QIAPAVLAGF LLAFTFSFDD FIIAFFVAGS ETTLPIYVFS SIRRGVTPEI NAIGTMVLLA SLVLLITAQV ILRRRAR
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