Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3037 |
Symbol | |
ID | 3721622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 71772 |
End bp | 72530 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640072712 |
Product | putative short-chain dehydrogenase/reductase |
Protein accession | YP_354553 |
Protein GI | 77465050 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCTCA AAGACCGCAC AGCCTTCGTC ACGGCGGGGG GCGCGGGGAT CGGCCGGGCC GGCGCGCTCG CCATGGCCCG CGCGGGCGCG ACCGTGGTCG TCACAGATCT CGACGCTTCG CGGGCGGAGG CGGTCGCTGC CGAGATCGCC GCGGCCGGTG GCCGGGCGGA AGGTCTCGGG CTGGATGTCG GCGACGATGC CGCTCTCGAG GCGGCCATCC TCTCGGCGGC CGCGCGACAC GGCAGGCTCG ACGTGCTGCA TTCCCACGCC GGCGCACAGG TGCCCGGCCG CCTCGATCAG GTGAGCGTCG CCGACATGGA TCTGTCCTGG CGGCTGAACG TGCGGGCGCA TTTCGTCGCG GCCAAGGCCG CCATGTCGAT CATGGCCCCG CGCAGACAGG GCTCGATCAT CGTCACCTCG TCGAATTCCG GCGTGCAGTA CGATCGCGAG ATGATCGCCT ATTGCACCAC GAAGCACGCG GTCATCGCCA TGGTTCGCCA GATCGCCGTC GATTATGCCC GCCACAACAT CCGCTGCAAC GCGCTCTGTC CGGGCTTCGT CGACACCGTC TTCAACGCGG GCTTCGAGGC GCAGATGGGC GGCCGCGCGG CGCTGGAGAG CTACGTCGCC GAGACCATCC CGATGGGCCG CTTCGGCACC CCGGAGGAAA TCGGCGAGGC GGTGCTCTAC CTCGCCTCGG ATCGCTCCGC CTTCATGACC GGCCATGCCC TCGTCATCGA CGGGGCGGAA AGCCTGTGA
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Protein sequence | MDLKDRTAFV TAGGAGIGRA GALAMARAGA TVVVTDLDAS RAEAVAAEIA AAGGRAEGLG LDVGDDAALE AAILSAAARH GRLDVLHSHA GAQVPGRLDQ VSVADMDLSW RLNVRAHFVA AKAAMSIMAP RRQGSIIVTS SNSGVQYDRE MIAYCTTKHA VIAMVRQIAV DYARHNIRCN ALCPGFVDTV FNAGFEAQMG GRAALESYVA ETIPMGRFGT PEEIGEAVLY LASDRSAFMT GHALVIDGAE SL
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