| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1412 |
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| Symbol | |
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| ID | 3721567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 926940 |
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| End bp | 929573 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640073478 |
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| Product | TRAP dicarboxylate family transporter DctQ subunit |
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| Protein accession | YP_355314 |
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| Protein GI | 77465811 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.358678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACG AGACCCAGCC GAAGAGCCGC AGCTTCACCG ACGAGGAGCT TCAGGATCTC
GTCGCGAGCA CCGACAGCGG CGGACGAAAT CCCTCCAACC GCACCGTCGC GATCCTGATC
GCGGCGACGG CGTTCCTGTG GTCGCTGTTC CAGCTCTGGA TCGCGCAGCC GCAGCTCTGG
TTCGGCCAGT ATCTGCCCGT GCTGAACTCG TCGCAGACCC GGCCCATCCA CCTGACCTTC
GCGATCCTGC TGGCCTTCCT CGCCTATCCG GCGCTGAAGA GTTCGCCGCG CGACCGGGTG
CCGATCCTCG ACTGGGTGCT GGCCCTCGCG GGGGCGGGCT GCGCCTTCTA TGTCTTCCTC
TATTCGCGCG AGCTGGCCGC GACCGCGCGC GCAGGCCTGC CGACCCAGAC CCAGATCGTG
GTGGGCGCGG TGGGGATCGT GCTCCTCCTC GAGGCCTCGC GCCGCGCGCT CGGGCCCGCG
CTGACCGTGG TGGGGGCGAT CTTCCTGCTC TACGCCTGGG TCGGGCAGGG CTGGCTCATT
CCCGACATCA TCGCCCATTC GGGCCTCTCC TTCACCTCGA TCGTGAATGC CCAGTGGCTC
GACACCAACG GCGTGTTCGG CATTCCGCTC GGCGTCTCGA CGGCCTTCGT CTTCCTCTTC
GTCCTGTTCG GGGCGCTGCT CGACAAGGCG GGAGCCGGCA ACTACTTCAT CCAGCTGGCC
TTCGCGGGTC TGGGCGCGCT GCGCGGCGGA CCTGCCAAGG CCGCCGTCGT GGGCTCGGCC
ATGACGGGCC TCATCTCCGG CTCCTCCATC GCCAACGTGG TGACGACGGG CACCTTCACC
ATCCCCCTGA TGAAGCGGGT GGGCTTCTCG TCGGAAAAGG CGGGCGCGGT CGAGGTGGCC
TCGTCGGTCA ACGGGCAGAT CATGCCGCCG GTGATGGGCG CCGCCGCCTT CCTGATGGTC
GAGTTCGTGG GCATCTCCTA CGTCGAGGTC ATCAAGCACG CCTTCATCCC GGCGGTGATC
TCCTACATCG CACTGGTCTA TATCGTGCAT CTCGAGGCGC TGAAGCAGGA CATGCCCGCG
CTCGGACCGG CGGCCAACCT CGGGCGCATG TTCGCGAAGA TCGCTGTGGG CTTCGTGGTG
ACGGGCGCAG CCTTCACCGG CCTCGTCTGG GCGATCCAGG CGCTGCGCGG GGCTGCACCC
GGGATCTCGG ACTGGATCGT GATGGCCGTG CTGGGCCTGG CCTATGTGCT GATGGTGCGC
GTCTCGGCGC GCCGGCCCGA TCTCGCGCTC GACGATCCGA ACGCGCGCCA GATCCGGCTC
CCCGCGGTGG CCGAGGTCTT CCCCACCGGC CTGCATTACC TGCTGCCGAT CCTCGTCCTC
GTCTGGTTCC TGATGATCGA GATGCAGTCG CCCGGAAAGT CGGCCTTCTA TGCCGTGGCG
GTGATGATCT TCATCATCGT GACTCAGCGG CCGCTGAAGG CTTTGTTCCG CGGCGAGGAT
GTGGGGCAGG CCTTCGGCGC GGGCTTCGGC GACCTGATCG AGGGCATGAT CGCGGGCGCG
CGCAACATGA TCGGCATCGG CGTCGCCACG GCGGCGGCGG GCATCATCGT GGCGACCGTG
ACCAAGACCC CGATCGGCAC CGAACTGGCC GGCCTCGTCG AGATGCTCTC GGGCGGCAAC
CTCTTCATCA TGCTGCTGCT CGTGGGGCTC TTCTCGCTGA TCCTCGGGAT GGGGCTGCCC
ACGACGGCCA ACTACATCGT GGTCTCCTCG CTGATGGCCT CGGTCGTGGT CTCGCTCGGC
GCGCAGGAGG GGCTGATCGT GCCGCTGATC GCGGCGCATC TCTTCGTCTT CTACTTCGGC
ATCATGGCCG ACGTGACCCC GCCCGTGGGC CTCGCGAGCT TCGCCGCCGC AGCCGTCTCG
GGGGGCGATC CGATCCGCAC CGGGATCACC GCCTTCTTCT ATTCGCTGCG GACGGCGGCG
CTGCCCTTCC TCTTCATCTA CAACCCGACG CTGATCCTCT ATGGCGTCGA TCTGGGGACA
TGGGCGGGCA TCCTTCAGGC CGTGGGCGTC TTCGCGGTGG CGACGGTGGC GATGCTCCTC
TTTGCCGCCG CGACCCAGGG CTACTTCCTC GCGCCCTCGC GGCTGTGGGA GCGCGCGGCG
CTCCTTCTCG TGGCCTTCAC GCTCTTCGTG CCGGGCTTCT GGCTCGACCG GATCCTGCCG
CGCTTCGAGG AACGCCCGCC GACCGAGCTT GCCCAGGCCT TCGATGCGGC CGAACCCGGC
GAGACGGTGC GCTTCGTGGT GCAGGGCCCG GACTTCGCCA CCGGTCGGCC CACGCGGCTG
ACGATGGTCC ACACGGTCGA AGCCGAGGCG CCGGCCACGG GACGGGCGGA GGCGGCCGGG
CTTCTCCTGC TGCCCGAAGA GGGGCGGCTC TACATGGACG AGCCGATGTT CGGCACCGAC
TACCAGCAGA AGCTGCAGGG CTTCGACTTC TACGGCACCG AACGGGTCGA GGTCTCGTCG
CTGCAAAGCC CCGCGCACCG GCCGCCGAAG CAGCTCTTCT ACATTCCGGC GCTGCTGCTT
CTGGGGCTCG TCATCGCGCT TCAGCGGCGA CGGCAGACCA AGCCCGCCTT CTGA
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| Protein sequence | MTDETQPKSR SFTDEELQDL VASTDSGGRN PSNRTVAILI AATAFLWSLF QLWIAQPQLW
FGQYLPVLNS SQTRPIHLTF AILLAFLAYP ALKSSPRDRV PILDWVLALA GAGCAFYVFL
YSRELAATAR AGLPTQTQIV VGAVGIVLLL EASRRALGPA LTVVGAIFLL YAWVGQGWLI
PDIIAHSGLS FTSIVNAQWL DTNGVFGIPL GVSTAFVFLF VLFGALLDKA GAGNYFIQLA
FAGLGALRGG PAKAAVVGSA MTGLISGSSI ANVVTTGTFT IPLMKRVGFS SEKAGAVEVA
SSVNGQIMPP VMGAAAFLMV EFVGISYVEV IKHAFIPAVI SYIALVYIVH LEALKQDMPA
LGPAANLGRM FAKIAVGFVV TGAAFTGLVW AIQALRGAAP GISDWIVMAV LGLAYVLMVR
VSARRPDLAL DDPNARQIRL PAVAEVFPTG LHYLLPILVL VWFLMIEMQS PGKSAFYAVA
VMIFIIVTQR PLKALFRGED VGQAFGAGFG DLIEGMIAGA RNMIGIGVAT AAAGIIVATV
TKTPIGTELA GLVEMLSGGN LFIMLLLVGL FSLILGMGLP TTANYIVVSS LMASVVVSLG
AQEGLIVPLI AAHLFVFYFG IMADVTPPVG LASFAAAAVS GGDPIRTGIT AFFYSLRTAA
LPFLFIYNPT LILYGVDLGT WAGILQAVGV FAVATVAMLL FAAATQGYFL APSRLWERAA
LLLVAFTLFV PGFWLDRILP RFEERPPTEL AQAFDAAEPG ETVRFVVQGP DFATGRPTRL
TMVHTVEAEA PATGRAEAAG LLLLPEEGRL YMDEPMFGTD YQQKLQGFDF YGTERVEVSS
LQSPAHRPPK QLFYIPALLL LGLVIALQRR RQTKPAF
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