| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_6094 |
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| Symbol | |
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| ID | 3719930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 1809282 |
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| End bp | 1811330 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640071302 |
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| Product | TRAP dicarboxylate family transporter DctM subunit |
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| Protein accession | YP_353174 |
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| Protein GI | 77463670 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.203798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAT TCATCGCGGT GAACATGGCG CCGATCATGT TCGCCTCGCT CGTGATCTTC
CTGCTGCTGG GCTATCCGGT GGCCTTCGCG CTGGCGGCCA ACGGGCTTCT GTTCTTCTTC
ATCGGGGTCG AGCTCGCCCC GCTGTCGGAA GGGACGATCA GCCTCGGCTG GAACCTTCTC
GGCACCATGC CGGACCGGTT CTGGGGGGTG CTCTCGAACG AGACGCTGCT CGCCATTCCC
TTCTTCACCT TCATGGGCAT CGTGCTGGAG CGATCCGGCA TGGCCGAGGA CCTGCTCGAC
ACGATCGGCC AGCTCTTCGG GCCGATCCGC GGCGGGCTGG CCTATGCGGT CATCATCGTG
GGCGCCCTTC TTGCGGCCAC CACGGGCGTC GTCGCGGCCT CGGTCATCGC CATGGGGCTG
ATCTCGCTGC CGATCATGCT GCGCTACGGC TACGATCGCC GCATCGCCTC GGGGGTCATC
GCGGCCTCCG GCACGCTGGC GCAGATCATC CCGCCGAGCC TCGTGCTGAT CGTGCTGGCC
GACCAGCTCG GCCGGTCGGT GGGCGACATG TACAAGGGGG CGCTGATCCC CGGCCTGATC
CTCACCGGGA TCTACATGGG CTATGTGCTC GTCATGTCGA TCCTGAAGCC GAAGTCGATG
CCGGCGCTGC CGCTCGAGGC GCGCACGCTG GGCTCTGGCG TCATGTCGCT GATCGTGGCG
CTGGCGGTGG CGGCGGGCGT GGGCGTGGCC ACGCATTACT GGCTCGCGGG CGCCTACGGG
GCCGAGAACG CGGACATCCT TGGCGCTGTG GCCGGGATCG CGGTGATCTA CATCGCCGCC
ATCCTCGACC GGGCCGCGGG CGGCAAGCTC ATGTCGCGGC TGGCGCAGCA GGTCATCATC
GTGCTGATCC CGCCGCTTGC GCTGATCTTC CTCGTGCTGG GCACGATCTT CCTCGGCATC
GCCACACCCA CCGAGGGCGG CGCGATGGGG GCGGTGGGTG CGCTTCTCCT CGCGGGGATC
AAGGGGCGGC TGAACCTCGC CGTGGTCACA CAGGCGCTGG CCTCGACCAC GCGGCTCTCG
GCCTTCGTCA TGTTCATCCT GCTCGGCGCA CGGATGTTCT CGCTGACCTT TTACGGCGTG
AACGGCCATA TCTGGGTCGA GCATCTGCTG ACCTCGCTGC CGGGGGGCGA ATACGGCTTC
CTGATCGCCG TCTCGGTGCT GGTCTTCTTC CTGGCCTTCT TCCTCGACTT CTTCGAGCTG
GCCTTCATCA TCGTGCCGCT GCTGGCGCCC GCGGCCGAGG CGCTGGGGAT CGACCTGATC
TGGTTCGGGA TCATCCTCGG CGTGAACATG CAGACCTCGT TCATGCACCC GCCCTTCGGC
TTTGCGCTGT TCTACCTGCG CTCGGTCGCG CCGCGTCAGT CCTACATCGA CCCGGTGACC
AAGGCGCGCA TGGCGCCGGT GACGACGGGA CAGATCTACT GGGGGGCGGT GCCCTTCGTC
TGCATCCAGA TCGTGATGGT GGCGCTGGTC ATCCTGTTCC CGCAGATGGT CATGCACTAC
AAGGGCGCGC CGGTGGATAC GTCGAACGTG ACCATCACGC TCCCGCAGAT GCCGGGTCTG
GGCGGCGGTC TGGGCGGAGG CCTCGGCGGC GGACTGGGCG GCGGGCTCGG AGCTCCGGGG
GCGCAGCCCG CTCCGGGCGC GGGTGGCCTC GGCGCTCCTC CGGGCCTTGC GCCGGGACAG
GCTCCGGCCC CGGGCGGGTT GGGAGCTCCT CCGGGGCTCG CCCCGGCGCC GGGAGGGCTC
GGGACGCCGC CCGGCCTTGC TCCGGTGGCT CCGGGTTCGG CACCGGCCCC GGGCGGGCTC
GGGGTTCCTC CGGGTCTCGC TCCGGCCACT CCGGCCCCGG CGCCCGGGGA AGCGCCTGCA
CCGGGCGCGC TGGAGGTGCC TGCCGCTCCC GCTCCGGCAA CGCCTTCTCC CGGCGCCGTT
CCGGGCGCGC CGCCCGGTCT CGCGCCGGGT GGACTGCCGC CGGGTCTGGC TCCGCCTGCG
CAGAATTGA
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| Protein sequence | MMEFIAVNMA PIMFASLVIF LLLGYPVAFA LAANGLLFFF IGVELAPLSE GTISLGWNLL
GTMPDRFWGV LSNETLLAIP FFTFMGIVLE RSGMAEDLLD TIGQLFGPIR GGLAYAVIIV
GALLAATTGV VAASVIAMGL ISLPIMLRYG YDRRIASGVI AASGTLAQII PPSLVLIVLA
DQLGRSVGDM YKGALIPGLI LTGIYMGYVL VMSILKPKSM PALPLEARTL GSGVMSLIVA
LAVAAGVGVA THYWLAGAYG AENADILGAV AGIAVIYIAA ILDRAAGGKL MSRLAQQVII
VLIPPLALIF LVLGTIFLGI ATPTEGGAMG AVGALLLAGI KGRLNLAVVT QALASTTRLS
AFVMFILLGA RMFSLTFYGV NGHIWVEHLL TSLPGGEYGF LIAVSVLVFF LAFFLDFFEL
AFIIVPLLAP AAEALGIDLI WFGIILGVNM QTSFMHPPFG FALFYLRSVA PRQSYIDPVT
KARMAPVTTG QIYWGAVPFV CIQIVMVALV ILFPQMVMHY KGAPVDTSNV TITLPQMPGL
GGGLGGGLGG GLGGGLGAPG AQPAPGAGGL GAPPGLAPGQ APAPGGLGAP PGLAPAPGGL
GTPPGLAPVA PGSAPAPGGL GVPPGLAPAT PAPAPGEAPA PGALEVPAAP APATPSPGAV
PGAPPGLAPG GLPPGLAPPA QN
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