| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4050 |
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| Symbol | pdhB |
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| ID | 3720099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 1121645 |
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| End bp | 1122973 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640070663 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_352544 |
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| Protein GI | 77463040 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.605618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCG AGATCCTGAT GCCCGCGCTG TCTCCGACGA TGGAGGAGGG GACGCTCGCG
AAATGGCTGA AGAAGGAAGG GGATGAGGTC CGCTCGGGCG ACATCATCGC CGAGATCGAG
ACCGACAAGG CCACCATGGA GTTCGAGGCG GTCGACGAGG GCATCCTCGG CAAGATCCTG
ATCGCCGAGG GCACGGCAGG CGTGAAGGTC AACACGCCCA TCGCCGTGCT GGTGGAAGAG
GGCGAGAGCG TGGACGCCGT GTCCTCCGCC AAGGTGCCGG AGCCGCAGGA ACCGGCCGAC
GAGGCCGCAC CCGCGCAGGG GGCTCCGAAG GAGGCCCCTG CCCCGGCCGC CAAGGCGCCC
GCGGCGCAGG CGGCCCGATC CGAGGGAGAG CGCGTCTTCG CCTCGCCGCT CGCCCGCCGG
ATCGCCAAGG AGAAGGGGAT CGACCTTGCC GCGGTGCAGG GCTCGGGCCC GCGCGGCCGG
ATCGTGAAGG CCGATGTCGA GGGGGCGCAA CCCTCGGCCG CTCCCGCCGC CAAGGCGGAC
GCCGCGGCAC CGAAGGCAGA AGCGCCCGCC GCTGCGGCCG CGCCCGTCGC CGCGCCGGCC
GCCTCCGCGG CTTCGGTGGC GAAGCTCTTC GCGGATCGCG ACTATGAGGA AGTGACCCTC
GACGGGATGC GCAAGACCAT TGCCGCGCGT CTGTCCGAGG CCAAGCAGAC CATCCCGCAC
TTCTACCTCC GGCGCGAGGT GGCTCTGGAT GCGCTGATGG CTTTCCGCGC CGATCTCAAT
GCGAAGCTCG AGAGCCGGGG CGTAAAGCTC TCGGTCAACG ACTTCATCAT CAAGGCCTGT
GCGGTGGCGC TCCAGCAGGT GCCGAACGCG AATGCCGTCT GGGCCGGAGA CCGGATCCTG
CGGCTGAAGC CCTCGGACGT GGCGGTGGCC GTGGCGATCG AGGGCGGGCT CTTCACGCCG
GTCCTGCGCG ATGCGCACCA GAAGAGCCTG TCGGCGCTGT CGGCCGAGAT GAAGGATCTC
GCCGCCCGCG CCCGCACGAA GAAGCTCGCA CCGCACGAAT ATCAGGGCGG CAGCTTCGCG
ATCTCGAACC TCGGCATGTT CGGGGTCGAG AATTTCGATG CGGTCATCAA CCCGCCGCAC
GGCTCGATCC TCGCCGTCGG CGCAGGCATC CGCAAGCCGG TGGTGGGCAA GGACGGCGCG
ATCACGACGG CCACCATGAT GTCGATGACG CTCTCGGTGG ACCACCGGGT GATCGACGGC
GCGCTGGGGG CCGAGTTCCT GAAGGCGATC GTCGAGAATC TCGAGAACCC GATCGCCATG
CTGGCCTGA
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| Protein sequence | MATEILMPAL SPTMEEGTLA KWLKKEGDEV RSGDIIAEIE TDKATMEFEA VDEGILGKIL
IAEGTAGVKV NTPIAVLVEE GESVDAVSSA KVPEPQEPAD EAAPAQGAPK EAPAPAAKAP
AAQAARSEGE RVFASPLARR IAKEKGIDLA AVQGSGPRGR IVKADVEGAQ PSAAPAAKAD
AAAPKAEAPA AAAAPVAAPA ASAASVAKLF ADRDYEEVTL DGMRKTIAAR LSEAKQTIPH
FYLRREVALD ALMAFRADLN AKLESRGVKL SVNDFIIKAC AVALQQVPNA NAVWAGDRIL
RLKPSDVAVA VAIEGGLFTP VLRDAHQKSL SALSAEMKDL AARARTKKLA PHEYQGGSFA
ISNLGMFGVE NFDAVINPPH GSILAVGAGI RKPVVGKDGA ITTATMMSMT LSVDHRVIDG
ALGAEFLKAI VENLENPIAM LA
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