| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2986 |
|---|
| Symbol | |
|---|
| ID | 3720305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 1676870 |
|---|
| End bp | 1678282 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640071173 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_353048 |
|---|
| Protein GI | 77463544 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0239395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGGC GGACACATTG GACGTGGAAG GACCAGACGA TGACGCTCGA CGCCGTGCTC
ACCCGGATCG ACACCGGCCT GCCCGAGGCT CTGGACCGGC TGATGGCGCT GTTGCGCATC
CCCTCGATCT CGACCGATCC CGCCCATGCC GCCGAATGCG AGGCCGCCGC CGACTGGCTG
GTGGCCGATC TCGCGTCGCT GGGCTTCGAG GTCTCGAAGC GCCCCACCCC CGGCCATCCG
ATGGTGGTGG CTCATGCCCC GGGTCAAGGG CCGCACCTGC TGTTCTACGG CCATTACGAC
GTGCAGCCCG TCGATCCGCT CTCGCTCTGG GACCGTCCGC CCTTCGAGCC GGCGATCGAG
GAGACGCCGC GCGGCAAGGT GATCCGCGGC CGCGGCGCCT CCGACGACAA GGGCCAGCTC
ATGACCTTCC TCGAGGCCTG CCGCGCCTGG AAGGCCGAGC ACGGCACGCT GCCCTGCCGC
CTCACGATCT TCCTCGAGGG CGAGGAGGAA TCGGGCTCGC CCTCGCTCGT GCCCTTCATG
AAGGAGAATG CCGAAGAGCT GACCGCGGAT GTGGCGCTGA TCTGCGACAC CGGCCTCTTC
GAATCGCGCA CGCCCGCCAT CGTGACCATG CTGCGCGGCC TGCTGGGCGA GGAGCTGGTG
GTGCGCGGCC CCTCGAAGGA CCTGCATTCC GGCATGTATG GCGGGGTCGC GATCAACCCG
ATCCGCGTGC TGACCCGCGC GCTCGCGGCC CTTCACGACG AGACCGGCCG CGTCACCCTG
CCCGGCTTCT ACGACGGCGT GAGCGAATTG CCCGAGGCGA TCCGCGCCCA GTGGCAGGGG
CTCGCCTTCG ATCACGCGCG CTTCCTCGGC GACGTGGGCC TCTCGCAGCC CGCAGGCGAA
GAGGATCGCA CACCCCTCGA GATGATCTGG TCGCGCCCCA CCTGCGAGAT CAACGGCATC
TGGGGCGGCT ATACCGGGGC GGGCTTCAAG ACGGTGCTGC CCGCCGAGGC CCATGCCAAG
GTCAGCTTCC GCCTCGTGGG CGAGCAGGAT CCGCATGCGA TCCGCGAGGC CTTCCGCGCC
CATGTCCGCG CGCATCTGCC CCCGGACTGC ACGGTCGAGT TCCACGGCCA CGGCAATTCC
AAGGCCTCGC ACATGCGCAC CTCCGCGCCC GCCTTCGAGC AGGCGCGCGC CGCGCTGACC
GAGGAATGGG GCCGGCCCGC CGCCTATGTG GGCTGCGGCG GCTCGATCCC GATCGCGGGC
CACTTCCAGA CGCTTCTCGG CATGGATGCG ATGCTCGTGG GCTTTGCGAA GGACGACGAT
CAGATCCATT CGCCGAACGA GAAATACGAC GTCGAGAGCT TCCACAAGGG CATCCGCTCC
TGGGCGCGCT TCCTCGCCCG CGTGACGGAA TGA
|
|---|
| Protein sequence | MLRRTHWTWK DQTMTLDAVL TRIDTGLPEA LDRLMALLRI PSISTDPAHA AECEAAADWL
VADLASLGFE VSKRPTPGHP MVVAHAPGQG PHLLFYGHYD VQPVDPLSLW DRPPFEPAIE
ETPRGKVIRG RGASDDKGQL MTFLEACRAW KAEHGTLPCR LTIFLEGEEE SGSPSLVPFM
KENAEELTAD VALICDTGLF ESRTPAIVTM LRGLLGEELV VRGPSKDLHS GMYGGVAINP
IRVLTRALAA LHDETGRVTL PGFYDGVSEL PEAIRAQWQG LAFDHARFLG DVGLSQPAGE
EDRTPLEMIW SRPTCEINGI WGGYTGAGFK TVLPAEAHAK VSFRLVGEQD PHAIREAFRA
HVRAHLPPDC TVEFHGHGNS KASHMRTSAP AFEQARAALT EEWGRPAAYV GCGGSIPIAG
HFQTLLGMDA MLVGFAKDDD QIHSPNEKYD VESFHKGIRS WARFLARVTE
|
|---|
| |