Gene RSP_2956 details

Gene Information

• Locus tag: RSP_2956
• Symbol: tktA
• ID: 3720408
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 1637358
• End bp: 1639376
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640071142
• Product: transketolase
• Protein accession: YP_353017
• Protein GI: 77463513
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACATAC AGAGCCTGCG CGAGCAGCAT CCCGATCACT GGAAGAAGGC CTGCGCCATC 
CGCGCGCTGA CGCTCGACGC CGTGGCAGCC GCCAATTCCG GTCACTCCGG CATGCCCATG 
GGCATGGCCG ACGTGGCCAC CGTGCTCTAC GAGAAGCACA TGGTGTTCGA CGCCCGGTCC 
CCCGACTGGC CGAACCGCGA CCGGTTCGTA CTGTCGGCCG GCCACGGCTC CATGCTGGTC 
TATGCGCTCC TGCATCTCAC GGGCGATCCC GAATTCCCGA TCGAGCAGAT CCGCAACTTC 
CGCCAGTGGG GCTCGAAGAC CGCGGGCCAC CCCGAGAACT TCCTTGCCAA GGGCATCGAG 
ACCACCACCG GCCCGCTCGG CCAGGGGCTT GCGATGTCCG TGGGCCTCGC CATGGCCGAA 
GAGTCGCTCC GCGCCCGCTG GGGCGCGAAG ATCATCGACC ATTACACCTA CTGCATCGCC 
GGTGACGGCT GCCTGATGGA GGGCGTGAGC CAGGAGGCGA TCGGCCTCGC CGGCCGCCAC 
GAGCTCTCGC ATCTCATCGT GATGTGGGAC AACAACGGCA TCACCATCGA CGGCAAGGTC 
TCACTCTCGG ACCGCACCGA CCAGAAGGCG CGCTTCGCCG CCGCGGGCTG GGACGTGTTC 
GAATGCGACG GGCACGATCC GGCCGACATC GACCGCGCCC TGACCGCGGC CAAGGCGTCG 
AAGGGCCCGG CCTTCATCGC CTGCACCACC CATATCGCGC TCGGATCCTC GGCGCAGGAC 
ACGTCGAAGG GCCATGGTGC GCTGACCGAT GCCAAGCTCA TCGCCGACAC CAAGGCCGCC 
TACGGCTGGA CCTCCGCCGC CTTCGAGATC CCGGCCGACG TCAAGAAAGC CTGGGAAGCC 
ATCGGCGCCC GCGGCGCCGA GGCCCGCAAG GCCTGGGACG AGCGTCTGGC AGCCCTCTCG 
GATGGCAAGC GCGCCCTCTT CCAGCAGCAG TTCTCCTGCG AGCCGCCGAA GAAGCTCGCC 
TCCGCCATCC GCGCGGTGAA GAAGGATGCG GTCGAGAAGA TGCCGAAGGT CGCGACCCGC 
CGCGCCTCGG AAATGGTGCT CGAGGCCGTG AACCCGGTCA TGCCCGAGAC CATCGGCGGC 
TCGGCCGACC TTACCGGCTC GAACAACACC AAGACCGCCG ATCTCGGCGT CTTCGATCCG 
ATCAACCGCA AGGGCCGCTA CGTCTATTAC GGCATCCGCG AGCACGGGAT GGCCGCGGCC 
ATGAACGGCA TGGCACTGCA CGGCGGCCTC CGGCCCTACG GCGGCACCTT CATGTGCTTC 
GCCGATTACT GCCGTCCGGC GATCCGCCTC TCGGCGCTGA TGCACATGCC CGTGGTCTAT 
GTCTTCACCC ACGATTCCAT CGGTCTGGGC GAGGACGGCC CGACGCACCA GCCGGTCGAG 
CATCTGGCCA TGCTGCGCGC CACGCCCAAC ATGATGGTGT TCCGCCCGGC CGACCTCGTC 
GAGACCGCCG AGGCCTGGGA GATCGCGCTC GGCGCCAAGG CCACGCCCTC GGTGCTGGCC 
CTCTCGCGGC AGAACCTGCC CGCGGTGCGC AAGAACCACA CCAACAAGAA CCTCGTGGCG 
CAGGGCGGCT ACGTCCTCGA AGAGGCCACG GGCAAGCGTC AGGTCATCCT GATCGCCTCG 
GGCTCGGAGG TCGAGGTCGC GCTGAAGGCC CGCGAGGCGC TCGAGGCCGA CGGCATCGGC 
ACCCGCGTCG TCTCCATGCC CTGCATGGAG CTCTTCGCGC AGCAGGACGA GGCCTACCGC 
CGCAAGGTCC TGCCCGCGGG CGCGGTCCGC ATCGCCATCG AGGCGGGTGT GCGCATGGGC 
TGGGACCGCT GGCTTCTGGG CGAGCGCGGC CGCGAAGGCA AGGACGGCTT CGTCGGCATG 
ACCGGCTTCG GCGCCTCGGC CCCGGCCGAG CGGCTGTTCC AGGAGTTCGG CATCACCTAC 
GAGGCGACCG TGGCGAAGGC CAAAGCCCTT CTGGGCTGA 

 

Protein sequence

MDIQSLREQH PDHWKKACAI RALTLDAVAA ANSGHSGMPM GMADVATVLY EKHMVFDARS 
PDWPNRDRFV LSAGHGSMLV YALLHLTGDP EFPIEQIRNF RQWGSKTAGH PENFLAKGIE 
TTTGPLGQGL AMSVGLAMAE ESLRARWGAK IIDHYTYCIA GDGCLMEGVS QEAIGLAGRH 
ELSHLIVMWD NNGITIDGKV SLSDRTDQKA RFAAAGWDVF ECDGHDPADI DRALTAAKAS 
KGPAFIACTT HIALGSSAQD TSKGHGALTD AKLIADTKAA YGWTSAAFEI PADVKKAWEA 
IGARGAEARK AWDERLAALS DGKRALFQQQ FSCEPPKKLA SAIRAVKKDA VEKMPKVATR 
RASEMVLEAV NPVMPETIGG SADLTGSNNT KTADLGVFDP INRKGRYVYY GIREHGMAAA 
MNGMALHGGL RPYGGTFMCF ADYCRPAIRL SALMHMPVVY VFTHDSIGLG EDGPTHQPVE 
HLAMLRATPN MMVFRPADLV ETAEAWEIAL GAKATPSVLA LSRQNLPAVR KNHTNKNLVA 
QGGYVLEEAT GKRQVILIAS GSEVEVALKA REALEADGIG TRVVSMPCME LFAQQDEAYR 
RKVLPAGAVR IAIEAGVRMG WDRWLLGERG REGKDGFVGM TGFGASAPAE RLFQEFGITY 
EATVAKAKAL LG