| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_2936 |
|---|
| Symbol | hutU |
|---|
| ID | 3720676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 1614750 |
|---|
| End bp | 1617476 |
|---|
| Gene Length | 2727 bp |
|---|
| Protein Length | 908 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640071122 |
|---|
| Product | urocanase |
|---|
| Protein accession | YP_352997 |
|---|
| Protein GI | 77463493 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2987] Urocanate hydratase |
|---|
| TIGRFAM ID | [TIGR01228] urocanate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCC GTCACAACCT GCGCGACATC TTCCCGCCCA CCGGCTCCAC CCTCTCGGCC
CGAAACTGGC AGTCCGAGGC GGCGTTGCGG ATGCTGATGA ACAACCTCCA TCCCGATGTG
GCCGAGAGTC CGCACGAGCT GGTGGTCTAT GGCGGGATCG GCCGCGCCGC CCGCAGCTGG
GAGGATTTCG ACCGGATCGT GGCGGCGCTC CGCGCGCTCG AGGCCGACGA GACGCTGCTC
GTGCAGTCGG GCCGCCCGGT CGGCGTCTTC CGCACCCACG AGGATGCGCC GCGGGTGCTG
ATCGCCAATT CCAACCTCGT GCCGCACTGG GCCACCTGGG AGCATTTCCA CGAGCTCGAC
CGCAAGGGGC TCATGATGTA CGGCCAGATG ACGGCCGGCA GCTGGATCTA TATCGGCACG
CAGGGCATCG TGCAGGGCAC CTACGAGACC TTCGCCGAGG TGGGGCGCCA GCAGTATGGC
GGCGATCTCA CCGGCCGCTG GGTGCTGACG GCGGGTCTCG GCGGCATGGG CGGCGCGCAG
CCGCTCGCCG CGGTGATGGC CGGCGCCTCC TGCCTCGCGG TCGAATGCGA CGAGAGCCGG
ATCGACGCCC GGCTGCGCAC CCGCTATCTC GACGAGAAGG CGCAGACGCT CGACGAGGCG
CTGGCGCTCA TCGCGCGCTG GACGGCCGCG GGCGAGGCGC GCTCGGTGGG GCTCCTCGGC
AATGCGGCCG AGGTCGTCCC CGAGATCCTC GCGCGGATGC GGGCGGGCGG GCCGCGCCCC
GACATCGTGA CCGACCAGAC CTCGGCCCAC GATCCGCTCC ACGGCTACCT CCCCGCGGGC
TGGAGCCTCG GCGACTGGCG GGCCCGGGCC GAAATCGATC CCGCCGCCGT CACGAAGGCC
GCCCGCGCCG CGATGCGCAC CCATGTCGAG GCGATGGTGG GCTTTCACGA TGCGGGCGTG
CCGACGCTCG ATTACGGCAA CAACATCCGC CAGATGGCGC TGGAGGAGGG CTTCGCGCGC
GCCTTCGCCT TCCCGGGCTT CGTGCCCGCC TGCATCCGCC CGCTCTTCTG CCGCGGGATC
GGCCCCTTCC GCTGGGTCGC CCTCTCGGGC GATCCCGAGG ACATCCGCAG GACCGATGCG
AAGATGAAGG AGCTCTTCCC CGACAATGCC CATCTCCACC GCTGGCTCGA CATGGCGGCC
GACCGGATCG CCTTCCAGGG CCTGCCCGCG CGGATCTGCT GGATCGGCCT CGGCGAGCGC
CACCTCGCGG GCCTCGCCTT CAACGAGATG GTGCGCCGGG GCGAGCTTGC GGCGCCCGTG
GTGATCGGGC GCGACCATCT CGATTCCGGC TCCGTCGCCT CGCCCAACCG CGAAACCGAG
GCGATGAAGG ACGGATCCGA TGCGGTGTCG GACTGGCCGC TCCTGAACGC ACTCCTCAAC
ACCGCCTCGG GTGCGACCTG GGTCTCGCTC CATCACGGCG GCGGCGTGGG GATGGGCTTC
TCGCAGCATG CGGGCATGGT GATCTGCTGC GACGGCAGCG CGGCCGCCGA CCGACGCCTC
GCCCGCGTGC TCTGGAACGA TCCCGCCACC GGCGTCATGC GCCACGCCGA CGCGGGCTAC
GAGGAGGCGC TCCAATGCGC CCGCACCCAC GGCCTCACGC TCCCCTCCAT CCCCGCCCCT
GATCCGCCAC GGCCCGCCCC CCTCGCCCCT TCATTCTGGC GCAAATATCC TCGGGGGGCG
CGGGGGGCAG ACAGCCCCCC GTCCGCCATC GGCCCCTCGC GCTTCCCGTC AGAGATGGAG
GGGGTTCGAC CAGGCCCGCC GCCCGGCCGC ATCGCGGATC GTCACCCGCA GGAAGGGGCT
CGCCCGGAAC CGTTCGATCG GCAGGCGCGC GCGGGTCATC GAGGCGCCGT GAAGCGCGGT
CGCGGCCGTG CCCGCCCCCT GCAGCACGAT GGCCGTCACC GCCGAACACT CCAGCTCGAT
CCAGTCGCCC TCCAGCGAGA CACGGCGCAG CTCCGGCCCC TGGCTCGCAT AGAAATCGCC
CCGCTTCAGC GCGGCGAGCA GCGCCTTGGG TTCATTCTCC TCGGCCTTCA CCATGACCCA
GCCGCCGAAA TGGTCGGGCT CGGTGAAATG CGCATCGTCC GTGGCGATCA GCGTGAGCCG
CCGCCCCTCG GTCAGCAGGA GGTCGGCCAG CGCGGCGCCG TCCGGGCGTT CGCAGCCCAT
GGCGCAACCG TGGTTGTAGA TCTCGACCGC ATGGGCGGCC GAGAGGCTCC GCGCATCGGC
CAGCGTCAGA CCCGACCATT GCGGATGGGC CACCGCCACG AAGGCGCCCG CCGCCACGGC
GCGCGCGGCG AGTGCGGGCC CCGTCTCCTG CCCGGGGCCC GCGCGGAAGT CCGGCACATC
GGGCGGGGTG AAATCCTCGG GCAGACCGAC GGCCAGGATA TGCCAGAGCT CGCCATTCTC
CATCGGCCCC GAATGCAGCT CGGCCCCGGG GAGCGTCGTG AAGCCCGGCG CGCGGAAGGG
GCGCGTGTCG GTGATCGGAT AGCCGTAGCG GCCCACGAAA TGATCGGTCA GCGCGAGGAA
ATCGTAGCCC TCGTCGCGGT AGCGCCGGCA GACCTCGGCG GGCTCGAGAC AGCCGTCCGA
GCGGGTCGAA TGGGTATGGA GGTTCCCGCG CCAGAAGCGG CCGGGAGCGG TGAAGGCAGA
GAGCGTCATG GGCGGGTCCT TGGCTGA
|
|---|
| Protein sequence | MTSRHNLRDI FPPTGSTLSA RNWQSEAALR MLMNNLHPDV AESPHELVVY GGIGRAARSW
EDFDRIVAAL RALEADETLL VQSGRPVGVF RTHEDAPRVL IANSNLVPHW ATWEHFHELD
RKGLMMYGQM TAGSWIYIGT QGIVQGTYET FAEVGRQQYG GDLTGRWVLT AGLGGMGGAQ
PLAAVMAGAS CLAVECDESR IDARLRTRYL DEKAQTLDEA LALIARWTAA GEARSVGLLG
NAAEVVPEIL ARMRAGGPRP DIVTDQTSAH DPLHGYLPAG WSLGDWRARA EIDPAAVTKA
ARAAMRTHVE AMVGFHDAGV PTLDYGNNIR QMALEEGFAR AFAFPGFVPA CIRPLFCRGI
GPFRWVALSG DPEDIRRTDA KMKELFPDNA HLHRWLDMAA DRIAFQGLPA RICWIGLGER
HLAGLAFNEM VRRGELAAPV VIGRDHLDSG SVASPNRETE AMKDGSDAVS DWPLLNALLN
TASGATWVSL HHGGGVGMGF SQHAGMVICC DGSAAADRRL ARVLWNDPAT GVMRHADAGY
EEALQCARTH GLTLPSIPAP DPPRPAPLAP SFWRKYPRGA RGADSPPSAI GPSRFPSEME
GVRPGPPPGR IADRHPQEGA RPEPFDRQAR AGHRGAVKRG RGRARPLQHD GRHRRTLQLD
PVALQRDTAQ LRPLARIEIA PLQRGEQRLG FILLGLHHDP AAEMVGLGEM RIVRGDQREP
PPLGQQEVGQ RGAVRAFAAH GATVVVDLDR MGGREAPRIG QRQTRPLRMG HRHEGARRHG
ARGECGPRLL PGARAEVRHI GRGEILGQTD GQDMPELAIL HRPRMQLGPG ERREARRAEG
ARVGDRIAVA AHEMIGQREE IVALVAVAPA DLGGLETAVR AGRMGMEVPA PEAAGSGEGR
ERHGRVLG
|
|---|
| |